RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	ATRNL1	Q5VV63	1379 aa		5.27	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ZMYM6	O95789	1325 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	DOCK2	Q92608	1830 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	MANSC4	A6NHS7	340 aa	Predicted RBP	5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	C22orf46	C9J442	243 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	NOP56	O00567	594 aa	Known RBP	5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	TBX1	O43435	398 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	EPB41L2	O43491	1005 aa	Known RBP	5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	RANBP6	O60518	1105 aa	Known RBP	5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	FGA	P02671	866 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ZBTB48	P10074	688 aa	Predicted RBP	5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CETP	P11597	493 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ZNF20	P17024	532 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	PSMA5	P28066	241 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	GTF2A2	P52657	109 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	USP14	P54578	494 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	MAP2K1	Q02750	393 aa	Predicted RBP	5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	PPAT	Q06203	517 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	SNAPC2	Q13487	334 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	NCAPH	Q15003	741 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ETV3L	Q6ZN32	361 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	TMEM179	Q6ZVK1	233 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	C16orf86	Q6ZW13	317 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	FASTKD5	Q7L8L6	764 aa	Known RBP	5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CCDC103	Q8IW40	242 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	SCYL3	Q8IZE3	742 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	NCOA7	Q8NI08	942 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	UBAC1	Q9BSL1	405 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	C1QTNF3	Q9BXJ4	246 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	STRIP2	Q9ULQ0	834 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ISY1	Q9ULR0	285 aa	Known RBP	5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	MYH7	P12883	1935 aa		5.26	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	RASSF10	A6NK89	507 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	C19orf81	C9J6K1	198 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	HMGB1	P09429	215 aa	Known RBP	5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	FPR2	P25090	351 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	RPL13	P26373	211 aa	Known RBP	5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	MAP2K2	P36507	400 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	PLCD1	P51178	756 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	HAND2	P61296	217 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ICA1	Q05084	483 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	VGLL4	Q14135	290 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ARHGEF6	Q15052	776 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	PRR31	Q5SQ13	230 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	AKNAD1	Q5T1N1	836 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CST9	Q5W186	159 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CD300LD	Q6UXZ3	194 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	SYNE3	Q6ZMZ3	975 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ZNF589	Q86UQ0	364 aa	Predicted RBP	5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	STK32C	Q86UX6	486 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ZFPM1	Q8IX07	1006 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289		Q8N1Y9	231 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	KY	Q8NBH2	561 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	BTN2A2	Q8WVV5	523 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	SEC14L1	Q92503	715 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ZKSCAN4	Q969J2	545 aa	Predicted RBP	5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	OPTN	Q96CV9	577 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	DYNLL2	Q96FJ2	89 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CAPNS2	Q96L46	248 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	C8orf49	Q96NF6	230 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	AP5M1	Q9H0R1	490 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	KANSL2	Q9H9L4	492 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ZNF112	Q9UJU3	913 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	INPP5F	Q9Y2H2	1132 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	RBM8A	Q9Y5S9	174 aa	Known RBP	5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ZHX2	Q9Y6X8	837 aa		5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	GOLGB1	Q14789	3259 aa	Known RBP	5.25	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	WDR33	Q9C0J8	1336 aa	Known RBP	5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ADAMTSL1	Q8N6G6	1762 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	PAPPA2	Q9BXP8	1791 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	TRPM7	Q96QT4	1865 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CXCL11	O14625	94 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CA12	O43570	354 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	TTLL1	O95922	423 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	GH2	P01242	217 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CHGB	P05060	677 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CYP2D6	P10635	497 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	NAT2	P11245	290 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	C6	P13671	934 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ATF4	P18848	351 aa	Predicted RBP	5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	SLC6A11	P48066	632 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	ITGA1	P56199	1179 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	RBM10	P98175	930 aa	Known RBP	5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	TFAP4	Q01664	338 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	IK	Q13123	557 aa	Predicted RBP	5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	PPIL2	Q13356	520 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	VPS53	Q5VIR6	699 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CYP4F22	Q6NT55	531 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	TATDN1	Q6P1N9	297 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	GADL1	Q6ZQY3	521 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	SKAP1	Q86WV1	359 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	RIOX2	Q8IUF8	465 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	CCAR1	Q8IX12	1150 aa	Known RBP	5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	FAM126B	Q8IXS8	530 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	TMTC2	Q8N394	836 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	KREMEN2	Q8NCW0	462 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	STAG1	Q8WVM7	1258 aa		5.24	□□□□□ -1.57
NSMCE4A-208	ENST00000477289	MAP4K1	Q92918	833 aa		5.24	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms