RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ICA1LQ8NDH6 482 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 ALG13Q9NP73 1137 aaKnown RBP19.61■□□□□ 0.73
VARS2-209ENST00000477288 PLEKHG2Q9H7P9 1386 aa19.61■□□□□ 0.73
VARS2-209ENST00000477288 BRAFP15056 766 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 HSD17B4P51659 736 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 KCNV1Q6PIU1 500 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 ZNF579Q8NAF0 562 aaKnown RBP19.6■□□□□ 0.73
VARS2-209ENST00000477288 SYTL2Q9HCH5 934 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 PARVAQ9NVD7 372 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 ADGRL3Q9HAR2 1447 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 DYNC1LI2O43237 492 aaPredicted RBP19.6■□□□□ 0.73
VARS2-209ENST00000477288 RARBP10826 455 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 MAD2L2Q9UI95 211 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 C6orf222P0C671 652 aaPredicted RBP19.6■□□□□ 0.73
VARS2-209ENST00000477288 AP3M2P53677 418 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 DMTNQ08495 405 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 APPL2Q8NEU8 664 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 ZNF263O14978 683 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 MAP4P27816 1152 aaKnown RBP19.6■□□□□ 0.73
VARS2-209ENST00000477288 LRRC74AQ0VAA2 488 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 SPDYAQ5MJ70 313 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 EML4Q9HC35 981 aaKnown RBP19.6■□□□□ 0.73
VARS2-209ENST00000477288 ESYT3A0FGR9 886 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 NEK2P51955 445 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 MDH1BQ5I0G3 518 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 FBXO38Q6PIJ6 1188 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 HAUS6Q7Z4H7 955 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 SP8Q8IXZ3 490 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 EFHBQ8N7U6 833 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 FAM167BQ9BTA0 163 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 ZSCAN32Q9NX65 697 aa19.6■□□□□ 0.73
VARS2-209ENST00000477288 MAFGO15525 162 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 FDX1P10109 184 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 EFNA5P52803 228 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 GLYCTKQ8IVS8 523 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 SNF8Q96H20 258 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 TMEM161AQ9NX61 479 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 HERC5Q9UII4 1024 aaKnown RBP19.59■□□□□ 0.73
VARS2-209ENST00000477288 TBC1D19Q8N5T2 526 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 YIPF3Q9GZM5 350 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 GFAPP14136 432 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 TMED8Q6PL24 325 aaPredicted RBP19.59■□□□□ 0.73
VARS2-209ENST00000477288 TRIM72Q6ZMU5 477 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 ANKMY2Q8IV38 441 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 ASAP3Q8TDY4 903 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 DDX47Q9H0S4 455 aaKnown RBP19.59■□□□□ 0.73
VARS2-209ENST00000477288 AGAP1Q9UPQ3 857 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 CHGBP05060 677 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 IGKV5-2P06315 115 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 NCAPHQ15003 741 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 TMCO5AQ8N6Q1 288 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 PGBD4Q96DM1 585 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 HMOX2P30519 316 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 ANO5Q75V66 913 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 PHF21AQ96BD5 680 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 KLHL11Q9NVR0 708 aa19.59■□□□□ 0.73
VARS2-209ENST00000477288 PRRG1O14668 218 aa19.58■□□□□ 0.73
VARS2-209ENST00000477288 CYP19A1P11511 503 aaPredicted RBP19.58■□□□□ 0.73
VARS2-209ENST00000477288 AKT1P31749 480 aa19.58■□□□□ 0.73
VARS2-209ENST00000477288 SKOR1P84550 965 aa19.58■□□□□ 0.73
VARS2-209ENST00000477288 ENOSF1Q7L5Y1 443 aa19.58■□□□□ 0.73
VARS2-209ENST00000477288 SEPT5Q99719 369 aaPredicted RBP19.58■□□□□ 0.73
VARS2-209ENST00000477288 A0A0G2JLW4 131 aa19.58■□□□□ 0.73
VARS2-209ENST00000477288 NPHP3-ACAD11A0A0J9YXS1 232 aa19.58■□□□□ 0.73
VARS2-209ENST00000477288 C5orf58C9J3I9 102 aa19.58■□□□□ 0.73
VARS2-209ENST00000477288 HSPA1AP0DMV8 641 aaKnown RBP19.58■□□□□ 0.73
VARS2-209ENST00000477288 HSPA1BP0DMV9 641 aaKnown RBP19.58■□□□□ 0.73
VARS2-209ENST00000477288 VCAM1P19320 739 aa19.58■□□□□ 0.73
VARS2-209ENST00000477288 CARSP49589 748 aaKnown RBP19.58■□□□□ 0.73
VARS2-209ENST00000477288 RNF17Q9BXT8 1623 aaKnown RBP19.58■□□□□ 0.72
VARS2-209ENST00000477288 CDC27P30260 824 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 TMEM62Q0P6H9 643 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 IZUMO3Q5VZ72 239 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 WNT8AQ9H1J5 351 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 ADNPQ9H2P0 1102 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 NDE1Q9NXR1 346 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 KIF28PB7ZC32 967 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 PPP2R2AP63151 447 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 KIZQ2M2Z5 673 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.58■□□□□ 0.72
VARS2-209ENST00000477288 IL10P22301 178 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 EPHA7Q15375 998 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 WDR72Q3MJ13 1102 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 USP33Q8TEY7 942 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 TMEM143Q96AN5 459 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 TSSK1BQ9BXA7 367 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 STOML1Q9UBI4 398 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 PCDHB8Q9UN66 801 aa19.58■□□□□ 0.72
VARS2-209ENST00000477288 CDC42BPGQ6DT37 1551 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 hCG_2014768A0A024R1R8 64 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 CCDC78A2IDD5 438 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 PPP3CCP48454 512 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 HIF1AQ16665 826 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 NUP93Q8N1F7 819 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 CNOT7Q9UIV1 285 aaKnown RBP19.57■□□□□ 0.72
VARS2-209ENST00000477288 SNX9Q9Y5X1 595 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 TLR2O60603 784 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 CYP2B6P20813 491 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 PCYT1AP49585 367 aa19.57■□□□□ 0.72
VARS2-209ENST00000477288 RGS7P49802 495 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms