RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
CLSTN1-205ENST00000477264 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 TTC4O95801 387 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 UBAP2Q5T6F2 1119 aaKnown RBP16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 OR52E8Q6IFG1 317 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 CEP128Q6ZU80 1094 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 MIGA2Q7L4E1 593 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 EZH1Q92800 747 aaPredicted RBP16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 SAR1AQ9NR31 198 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 DLGAP2Q9P1A6 1054 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 PDP2Q9P2J9 529 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 ITIH2P19823 946 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 ABCB4P21439 1286 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 TNFAIP3P21580 790 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 TUBP50607 506 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 SLC18A1P54219 525 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 EIF6P56537 245 aaKnown RBP16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 SNX1Q13596 522 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 TCERG1LQ5VWI1 586 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 RHBDF2Q6PJF5 856 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 LONP2Q86WA8 852 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 CCDC25Q86WR0 208 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 LRRC8CQ8TDW0 803 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 FGD4Q96M96 766 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 PIGSQ96S52 555 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 CCDC77Q9BR77 488 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 TBC1D10AQ9BXI6 508 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 ALG6Q9Y672 507 aa16.28■□□□□ 0.2
CLSTN1-205ENST00000477264 MARCH6O60337 910 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 MTA2O94776 668 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 NR3C1P04150 777 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 GOLGA8HP0CJ92 632 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 PTPN4P29074 926 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 NFIL3Q16649 462 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 GSTA3Q16772 222 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 B4GALNT2Q8NHY0 566 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 ZNF398Q8TD17 642 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 ARHGEF26Q96DR7 871 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 LRRC19Q9H756 370 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 IRAK4Q9NWZ3 460 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 FAM198AQ9UFP1 575 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 PCDHA12Q9UN75 941 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 CHKBQ9Y259 395 aa16.27■□□□□ 0.2
CLSTN1-205ENST00000477264 MARK3P27448 753 aa16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 RNASELQ05823 741 aaKnown RBP16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 GABPAQ06546 454 aa16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 MOGSQ13724 837 aa16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 STAT4Q14765 748 aa16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 KIF22Q14807 665 aa16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 SLC13A5Q86YT5 568 aaPredicted RBP16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 SLC7A6OSQ96CW6 309 aaPredicted RBP16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 DDX23Q9BUQ8 820 aaKnown RBP16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 PLVAPQ9BX97 442 aa16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 NMRK1Q9NWW6 199 aa16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 PI4KBQ9UBF8 816 aa16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 STK24Q9Y6E0 443 aa16.27■□□□□ 0.19
CLSTN1-205ENST00000477264 MAGEA13PA6NCF6 341 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 FAM47DPA6NHR8 397 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 E9PMD0 336 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 EDIL3O43854 480 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 ENTPD3O75355 529 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 AKAP3O75969 853 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 ACSL3O95573 720 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 GM2AP17900 193 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 TARSP26639 723 aaKnown RBP16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 PSMC4P43686 418 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 SLC12A3P55017 1021 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 DRAP1Q14919 205 aaPredicted RBP16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 NEDD1Q8NHV4 660 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 HAS1Q92839 578 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 SNF8Q96H20 258 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 MKNK1Q9BUB5 465 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 TUBB6Q9BUF5 446 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 THAP2Q9H0W7 228 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 DMAP1Q9NPF5 467 aaPredicted RBP16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 LARSQ9P2J5 1176 aaKnown RBP16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 KIAA1024Q9UPX6 916 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 GH1P01241 217 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 MUTP22033 750 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 RPS12P25398 132 aaKnown RBP16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 RFC5P40937 340 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 CCDC6Q16204 474 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 ZFPM1Q8IX07 1006 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 FAM81AQ8TBF8 368 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 MAIP1Q8WWC4 291 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 KIAA1683Q9H0B3 1180 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 AAASQ9NRG9 546 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 HAO1Q9UJM8 370 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 SLC4A7Q9Y6M7 1214 aa16.26■□□□□ 0.19
CLSTN1-205ENST00000477264 ASTN1O14525 1302 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 SIGLEC16A6NMB1 481 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 ANKRD63C9JTQ0 380 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 CREB1P16220 341 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 TNNI2P48788 182 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 MPP2Q14168 576 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 KPNB1Q14974 876 aaKnown RBP16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 LRRC23Q53EV4 343 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms