RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CDC42EP1Q00587 391 aa15.64■□□□□ 0.09
COL4A6-206ENST00000477085 MAPK8IP2Q13387 824 aaPredicted RBP15.64■□□□□ 0.09
COL4A6-206ENST00000477085 TMEM132AQ24JP5 1023 aa15.64■□□□□ 0.09
COL4A6-206ENST00000477085 USP37Q86T82 979 aa15.64■□□□□ 0.09
COL4A6-206ENST00000477085 FBXL13Q8NEE6 735 aa15.64■□□□□ 0.09
COL4A6-206ENST00000477085 HELQQ8TDG4 1101 aa15.64■□□□□ 0.09
COL4A6-206ENST00000477085 TATDN2Q93075 761 aa15.64■□□□□ 0.09
COL4A6-206ENST00000477085 KREMEN1Q96MU8 473 aa15.64■□□□□ 0.09
COL4A6-206ENST00000477085 UBE2TQ9NPD8 197 aaPredicted RBP15.64■□□□□ 0.09
COL4A6-206ENST00000477085 MYO6Q9UM54 1294 aa15.64■□□□□ 0.09
COL4A6-206ENST00000477085 FOXN3O00409 490 aaPredicted RBP15.63■□□□□ 0.09
COL4A6-206ENST00000477085 SERPING1P05155 500 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 CCDC175P0C221 793 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 STAG3L1P0CL83 205 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 MCF2P10911 925 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 CYP27A1Q02318 531 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 CETN1Q12798 172 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 SNX17Q15036 470 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 SESTD1Q86VW0 696 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 CCDC170Q8IYT3 715 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 TMEM130Q8N3G9 435 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 NME8Q8N427 588 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 OLIG1Q8TAK6 271 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 SH3TC2Q8TF17 1288 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 SPAG5Q96R06 1193 aa15.63■□□□□ 0.09
COL4A6-206ENST00000477085 RCCD1A6NED2 376 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 EIF3CLB5ME19 914 aaKnown RBP15.62■□□□□ 0.09
COL4A6-206ENST00000477085 ZSCAN12O43309 604 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 OFD1O75665 1012 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 ERLIN2O94905 339 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 CST3P01034 146 aaPredicted RBP15.62■□□□□ 0.09
COL4A6-206ENST00000477085 CXCL8P10145 99 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 ARHGAP25P42331 645 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 ACLYP53396 1101 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 CRYBB1P53674 252 aaPredicted RBP15.62■□□□□ 0.09
COL4A6-206ENST00000477085 PRMT2P55345 433 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 ASIC2Q16515 512 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 ARHGAP44Q17R89 818 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 FAM47CQ5HY64 1035 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 SERINC5Q86VE9 423 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 EFCAB13Q8IY85 973 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 FAM212AQ96EL1 285 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 CCDC42Q96M95 316 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 EIF3CQ99613 913 aaKnown RBP15.62■□□□□ 0.09
COL4A6-206ENST00000477085 OSBPL7Q9BZF2 842 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 CXCL16Q9H2A7 254 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 HAUS4Q9H6D7 363 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 SSU72P8A0A1W2PR75 194 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 FANCGO15287 622 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 GFPT2O94808 682 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 LCA5LO95447 670 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 HLA-DRAP01903 254 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 SOX5P35711 763 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 KIF11P52732 1056 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 PTK2Q05397 1052 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 GFPT1Q06210 699 aaPredicted RBP15.62■□□□□ 0.09
COL4A6-206ENST00000477085 SLC10A6Q3KNW5 377 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 SLC9C1Q4G0N8 1177 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 TAF2Q6P1X5 1199 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 CATSPER4Q7RTX7 472 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 ZNF571Q7Z3V5 609 aaPredicted RBP15.62■□□□□ 0.09
COL4A6-206ENST00000477085 RNF180Q86T96 592 aa15.62■□□□□ 0.09
COL4A6-206ENST00000477085 PCSK9Q8NBP7 692 aaKnown RBP15.62■□□□□ 0.09
COL4A6-206ENST00000477085 EIF2AQ9BY44 585 aaKnown RBP15.62■□□□□ 0.09
COL4A6-206ENST00000477085 IRX2Q9BZI1 471 aaPredicted RBP15.62■□□□□ 0.09
COL4A6-206ENST00000477085 HMX1Q9NP08 348 aaPredicted RBP15.62■□□□□ 0.09
COL4A6-206ENST00000477085 LACTBL1A8MY62 500 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 B4GALT4O60513 344 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 CHRNA1P02708 482 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 TNNT1P13805 278 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 PRKCIP41743 596 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 STAT1P42224 750 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 KLHL30Q0D2K2 578 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 HSP90AA2PQ14568 343 aaPredicted RBP15.61■□□□□ 0.09
COL4A6-206ENST00000477085 ARHGEF6Q15052 776 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 PTPN14Q15678 1187 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 WDR49Q8IV35 697 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 CELF4Q9BZC1 486 aaKnown RBP15.61■□□□□ 0.09
COL4A6-206ENST00000477085 MTMR12Q9C0I1 747 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 APOBEC3GQ9HC16 384 aaKnown RBP15.61■□□□□ 0.09
COL4A6-206ENST00000477085 TRIM10Q9UDY6 481 aa15.61■□□□□ 0.09
COL4A6-206ENST00000477085 EVI5O60447 810 aa15.6■□□□□ 0.09
COL4A6-206ENST00000477085 CLTAP09496 248 aa15.6■□□□□ 0.09
COL4A6-206ENST00000477085 CYLC1P35663 651 aaPredicted RBP15.6■□□□□ 0.09
COL4A6-206ENST00000477085 ITGA7Q13683 1181 aa15.6■□□□□ 0.09
COL4A6-206ENST00000477085 SPOPLQ6IQ16 392 aa15.6■□□□□ 0.09
COL4A6-206ENST00000477085 SYT11Q9BT88 431 aa15.6■□□□□ 0.09
COL4A6-206ENST00000477085 LACRTQ9GZZ8 138 aa15.6■□□□□ 0.09
COL4A6-206ENST00000477085 RPF1Q9H9Y2 349 aaKnown RBP15.6■□□□□ 0.09
COL4A6-206ENST00000477085 LZTFL1Q9NQ48 299 aa15.6■□□□□ 0.09
COL4A6-206ENST00000477085 WBP1LQ9NX94 342 aa15.6■□□□□ 0.09
COL4A6-206ENST00000477085 NOC2LQ9Y3T9 749 aaKnown RBP15.6■□□□□ 0.09
COL4A6-206ENST00000477085 A0A087X0T9 212 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 CCP110O43303 1012 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 NPTXRO95502 500 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 NFICP08651 508 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 FAM228BP0C875 321 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 RFX1P22670 979 aa15.59■□□□□ 0.09
COL4A6-206ENST00000477085 MRPS6P82932 125 aaKnown RBP15.59■□□□□ 0.09
COL4A6-206ENST00000477085 MGAT3Q09327 533 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms