RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MTRQ99707 1265 aa12.64□□□□□ -0.39
BRCA1-213ENST00000476777 AGXT2Q9BYV1 514 aa12.64□□□□□ -0.39
BRCA1-213ENST00000476777 SLKQ9H2G2 1235 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-213ENST00000476777 NCOA5Q9HCD5 579 aaKnown RBP12.64□□□□□ -0.39
BRCA1-213ENST00000476777 KCNMB3Q9NPA1 279 aa12.64□□□□□ -0.39
BRCA1-213ENST00000476777 HCFC1R1Q9NWW0 138 aa12.64□□□□□ -0.39
BRCA1-213ENST00000476777 KLK14Q9P0G3 267 aa12.64□□□□□ -0.39
BRCA1-213ENST00000476777 DNMT3BQ9UBC3 853 aaKnown RBP12.64□□□□□ -0.39
BRCA1-213ENST00000476777 GMEB2Q9UKD1 530 aa12.64□□□□□ -0.39
BRCA1-213ENST00000476777 ZMYM2Q9UBW7 1377 aa12.64□□□□□ -0.39
BRCA1-213ENST00000476777 VWA8A3KMH1 1905 aa12.64□□□□□ -0.39
BRCA1-213ENST00000476777 RALGAPA1Q6GYQ0 2036 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 B4GALT5O43286 388 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 ECI2O75521 394 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 KIF4AO95239 1232 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 NPTXRO95502 500 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 ADCY1Q08828 1119 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 TUSC3Q13454 348 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 PABPC1LQ4VXU2 614 aaKnown RBP12.63□□□□□ -0.39
BRCA1-213ENST00000476777 XKR9Q5GH70 373 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 AXDND1Q5T1B0 1012 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-213ENST00000476777 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 OTUD6AQ7L8S5 288 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 CDR2LQ86X02 465 aaPredicted RBP12.63□□□□□ -0.39
BRCA1-213ENST00000476777 CEP57Q86XR8 500 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 ZNF687Q8N1G0 1237 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 DAGLBQ8NCG7 672 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 ASAP3Q8TDY4 903 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 ING5Q8WYH8 240 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 HAS1Q92839 578 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 JAKMIP1Q96N16 626 aaKnown RBP12.63□□□□□ -0.39
BRCA1-213ENST00000476777 PLA2G2FQ9BZM2 168 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 HEBP1Q9NRV9 189 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 RGL1Q9NZL6 768 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 PARP2Q9UGN5 583 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 LAMA1P25391 3075 aa12.63□□□□□ -0.39
BRCA1-213ENST00000476777 A0A1B0GUA9 196 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 CASTOR2A6NHX0 329 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 SLC30A4O14863 429 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 PDIA3P30101 505 aaKnown RBP12.62□□□□□ -0.39
BRCA1-213ENST00000476777 EVCP57679 992 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 CCT2P78371 535 aaKnown RBP12.62□□□□□ -0.39
BRCA1-213ENST00000476777 SPEM2Q0P670 501 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 CAPSQ13938 189 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 RAB33AQ14088 237 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 TFDP1Q14186 410 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 CTTNQ14247 550 aaKnown RBP12.62□□□□□ -0.39
BRCA1-213ENST00000476777 EPHA7Q15375 998 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 UVSSAQ2YD98 709 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 BMP2KLQ5H9B9 411 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 SLC27A1Q6PCB7 646 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 BLOC1S2Q6QNY1 142 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 NFKBIZQ9BYH8 718 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 ZSWIM4Q9H7M6 989 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 GDE1Q9NZC3 331 aa12.62□□□□□ -0.39
BRCA1-213ENST00000476777 MRPS17Q9Y2R5 130 aaKnown RBP12.62□□□□□ -0.39
BRCA1-213ENST00000476777 MRPS23Q9Y3D9 190 aaKnown RBP12.62□□□□□ -0.39
BRCA1-213ENST00000476777 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.62□□□□□ -0.39
BRCA1-213ENST00000476777 ARID2Q68CP9 1835 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 ARL2P36404 184 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 SPIRE1Q08AE8 756 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 LPAL2Q16609 132 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 SLC5A9Q2M3M2 681 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 PPM1JQ5JR12 505 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 LAIR1Q6GTX8 287 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 TANGO2Q6ICL3 276 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 PPP4R3AQ6IN85 833 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 GALNT17Q6IS24 598 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 PDXDC1Q6P996 788 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 KRT25Q7Z3Z0 450 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 CELF5Q8N6W0 485 aaKnown RBP12.61□□□□□ -0.39
BRCA1-213ENST00000476777 NETO1Q8TDF5 533 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 MCRS1Q96EZ8 462 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 DYDC2Q96IM9 177 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 CHRDQ9H2X0 955 aa12.61□□□□□ -0.39
BRCA1-213ENST00000476777 PTGESO14684 152 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 TBX3O15119 743 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 LRP3O75074 770 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 DEXIO95424 95 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 RETP07949 1114 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 RHOP08100 348 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 GLRA2P23416 452 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 RPS6KB1P23443 525 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 OR1D2P34982 312 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 NRLP54845 237 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 CYP4A11Q02928 519 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
BRCA1-213ENST00000476777 ELAVL2Q12926 359 aaKnown RBP12.6□□□□□ -0.39
BRCA1-213ENST00000476777 NAB2Q15742 525 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 NCAPH2Q6IBW4 605 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 RTL10Q7L3V2 364 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 FAM177A1Q8N128 213 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-213ENST00000476777 DNASE1L2Q92874 299 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 ELSPBP1Q96BH3 223 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 AIFM3Q96NN9 605 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 CXCL16Q9H2A7 254 aa12.6□□□□□ -0.39
BRCA1-213ENST00000476777 AVENQ9NQS1 362 aaPredicted RBP12.6□□□□□ -0.39
BRCA1-213ENST00000476777 RAB23Q9ULC3 237 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms