RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	CASTOR2	A6NHX0	329 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	TTLL13P	A6NNM8	815 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	C2CD2L	O14523	706 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	PTGES	O14684	152 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	SPTLC2	O15270	562 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	DCX	O43602	365 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	B4GALT3	O60512	393 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	ZSCAN22	P10073	491 aa	Predicted RBP	11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	HARS	P12081	509 aa	Known RBP	11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	GAP43	P17677	238 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	ZNF131	P52739	623 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	AMPD3	Q01432	767 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	ATAT1	Q5SQI0	421 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	DCLRE1A	Q6PJP8	1040 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	CYP26C1	Q6V0L0	522 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	STXBP4	Q6ZWJ1	553 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	ZBTB33	Q86T24	672 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	GSTCD	Q8NEC7	633 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	KCNG4	Q8TDN1	519 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	HDAC7	Q8WUI4	952 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	AUTS2	Q8WXX7	1259 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	HVCN1	Q96D96	273 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	EPSTI1	Q96J88	318 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	FBXL18	Q96ME1	805 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	KLHL5	Q96PQ7	755 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	TSPAN18	Q96SJ8	248 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	PYM1	Q9BRP8	204 aa	Known RBP	11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	ADAM7	Q9H2U9	754 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	CUEDC2	Q9H467	287 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	PTPRH	Q9HD43	1115 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	BLOC1S4	Q9NUP1	217 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	FNIP2	Q9P278	1114 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	EXOC7	Q9UPT5	735 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	MUC3A	Q02505	3323 aa		11.17	□□□□□ -0.62
CCM2-208	ENST00000476594	C19orf67	A6NJJ6	358 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	TMEM189-UBE2V1	I3L0A0	370 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	F13A1	P00488	732 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	EDN1	P05305	212 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	CLTA	P09496	248 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	CNP	P09543	421 aa	Known RBP	11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	PROZ	P22891	400 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	CLCN4	P51793	760 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	OSTN	P61366	133 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	GRIN1	Q05586	938 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	PPP2R3A	Q06190	1150 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	MCL1	Q07820	350 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	ALCAM	Q13740	583 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	ARSH	Q5FYA8	562 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	SPECC1	Q5M775	1068 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	SLFN12L	Q6IEE8	588 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	FAM173B	Q6P4H8	233 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	C15orf39	Q6ZRI6	1047 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	TAS1R3	Q7RTX0	852 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	CD302	Q8IX05	232 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	RNF168	Q8IYW5	571 aa	Predicted RBP	11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	LINC00301	Q8NCQ3	95 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	VN1R2	Q8NFZ6	395 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	RIN2	Q8WYP3	895 aa	Predicted RBP	11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	SUSD6	Q92537	303 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	SNX27	Q96L92	541 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	TTPAL	Q9BTX7	342 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	PLEKHA4	Q9H4M7	779 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	PLEKHA5	Q9HAU0	1116 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	RXFP1	Q9HBX9	757 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	CHST7	Q9NS84	486 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	TBX20	Q9UMR3	447 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	USP20	Q9Y2K6	914 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	NUB1	Q9Y5A7	615 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	ATP6V1D	Q9Y5K8	247 aa		11.16	□□□□□ -0.62
CCM2-208	ENST00000476594	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	SMIM28	A0A1B0GU29	152 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	PI4K2B	G5E9Z4	385 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	TEX28	O15482	410 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	CUTA	O60888	179 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	B3GAT3	O94766	335 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	KIF4A	O95239	1232 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	PIGR	P01833	764 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	KCNE1	P15382	129 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	EPCAM	P16422	314 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	RPL9	P32969	192 aa	Known RBP	11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	BECN1	Q14457	450 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	POSTN	Q15063	836 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	GLRA4	Q5JXX5	417 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	TMEM31	Q5JXX7	168 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	RARS2	Q5T160	578 aa	Known RBP	11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	LIN9	Q5TKA1	542 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	FAM171A1	Q5VUB5	890 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	KIAA0319	Q5VV43	1072 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	SYCE2	Q6PIF2	218 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	CCDC149	Q6ZUS6	474 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	DYM	Q7RTS9	669 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	CEP57	Q86XR8	500 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	MAP4K3	Q8IVH8	894 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	SLC22A17	Q8WUG5	538 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	DDX12P	Q92771	950 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	STAM	Q92783	540 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	ACSF2	Q96CM8	615 aa	Predicted RBP	11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	RPGRIP1	Q96KN7	1286 aa		11.15	□□□□□ -0.62
CCM2-208	ENST00000476594	CLIC6	Q96NY7	704 aa		11.15	□□□□□ -0.62

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