RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ALKAL1Q6UXT8 129 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 TMEM175Q9BSA9 504 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 NUP62CLQ9H1M0 184 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 PCIF1Q9H4Z3 704 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 CNTN3Q9P232 1028 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 DDHD2O94830 711 aa32.18■■■□□ 2.74
HOXB3-208ENST00000476342 MCM4P33991 863 aa32.18■■■□□ 2.74
HOXB3-208ENST00000476342 BCAR1P56945 870 aa32.18■■■□□ 2.74
HOXB3-208ENST00000476342 SLC10A6Q3KNW5 377 aa32.18■■■□□ 2.74
HOXB3-208ENST00000476342 GPT2Q8TD30 523 aa32.18■■■□□ 2.74
HOXB3-208ENST00000476342 PRDM12Q9H4Q4 367 aa32.18■■■□□ 2.74
HOXB3-208ENST00000476342 MAN1B1Q9UKM7 699 aa32.18■■■□□ 2.74
HOXB3-208ENST00000476342 PLAGL2Q9UPG8 496 aa32.18■■■□□ 2.74
HOXB3-208ENST00000476342 MAPK8IP1Q9UQF2 711 aa32.18■■■□□ 2.74
HOXB3-208ENST00000476342 DSC1Q08554 894 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 ENOX2Q16206 610 aaKnown RBP32.17■■■□□ 2.74
HOXB3-208ENST00000476342 GLRA4Q5JXX5 417 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 CD302Q8IX05 232 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 GPD1LQ8N335 351 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 SAAL1Q96ER3 474 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 FAM213AQ9BRX8 229 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 KCTD10Q9H3F6 313 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 KIAA1468Q9P260 1216 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 DNAJB4Q9UDY4 337 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 COL4A4P53420 1690 aaPredicted RBP32.17■■■□□ 2.74
HOXB3-208ENST00000476342 PDCD11Q14690 1871 aaKnown RBP32.17■■■□□ 2.74
HOXB3-208ENST00000476342 SMIM28A0A1B0GU29 152 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 H3BNC9 293 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 PDXKO00764 312 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 EXTL3O43909 919 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 KCNE1P15382 129 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 HSP90AA2PQ14568 343 aaPredicted RBP32.17■■■□□ 2.74
HOXB3-208ENST00000476342 COBLL1Q53SF7 1204 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 C12orf56Q8IXR9 622 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 COLGALT2Q8IYK4 626 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 SMYD4Q8IYR2 804 aaPredicted RBP32.17■■■□□ 2.74
HOXB3-208ENST00000476342 CXCL16Q9H2A7 254 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 SLC38A7Q9NVC3 462 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 HSPBP1Q9NZL4 362 aa32.17■■■□□ 2.74
HOXB3-208ENST00000476342 TTC26A0AVF1 554 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 EPOPA6NHQ4 379 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 CLIC2O15247 247 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 ALDH2P05091 517 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 GALTP07902 379 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 TUSC3Q13454 348 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 GPM6BQ13491 265 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 KLHL23Q8NBE8 558 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 GDPD5Q8WTR4 605 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 NOC3LQ8WTT2 800 aaKnown RBP32.16■■■□□ 2.74
HOXB3-208ENST00000476342 PPP1R10Q96QC0 940 aaKnown RBP32.16■■■□□ 2.74
HOXB3-208ENST00000476342 KIAA1586Q9HCI6 787 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 MTMR10Q9NXD2 777 aa32.16■■■□□ 2.74
HOXB3-208ENST00000476342 CALUO43852 315 aaPredicted RBP32.15■■■□□ 2.74
HOXB3-208ENST00000476342 B4GALT3O60512 393 aa32.15■■■□□ 2.74
HOXB3-208ENST00000476342 PBX3P40426 434 aa32.15■■■□□ 2.74
HOXB3-208ENST00000476342 STIM1Q13586 685 aa32.15■■■□□ 2.74
HOXB3-208ENST00000476342 CRELD2Q6UXH1 353 aaPredicted RBP32.15■■■□□ 2.74
HOXB3-208ENST00000476342 FAM212AQ96EL1 285 aa32.15■■■□□ 2.74
HOXB3-208ENST00000476342 TSPAN18Q96SJ8 248 aa32.15■■■□□ 2.74
HOXB3-208ENST00000476342 GAS2L1Q99501 681 aaPredicted RBP32.15■■■□□ 2.74
HOXB3-208ENST00000476342 SPG21Q9NZD8 308 aa32.15■■■□□ 2.74
HOXB3-208ENST00000476342 MEFVO15553 781 aaPredicted RBP32.14■■■□□ 2.74
HOXB3-208ENST00000476342 ADRB2P07550 413 aa32.14■■■□□ 2.74
HOXB3-208ENST00000476342 PPP1R2P41236 205 aa32.14■■■□□ 2.74
HOXB3-208ENST00000476342 SLC11A1P49279 550 aa32.14■■■□□ 2.74
HOXB3-208ENST00000476342 SLC39A11Q8N1S5 342 aa32.14■■■□□ 2.74
HOXB3-208ENST00000476342 TRIML1Q8N9V2 468 aa32.14■■■□□ 2.74
HOXB3-208ENST00000476342 FAN1Q9Y2M0 1017 aa32.14■■■□□ 2.74
HOXB3-208ENST00000476342 GTF3C5Q9Y5Q8 519 aaPredicted RBP32.14■■■□□ 2.74
HOXB3-208ENST00000476342 ANK1P16157 1881 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 GOLGA8IPA6NC78 632 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 GOLGA8JA6NMD2 632 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 FGF18O76093 207 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 PRCPP42785 496 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 OR1G1P47890 313 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 CYP2J2P51589 502 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 MORC3Q14149 939 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 NAB2Q15742 525 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 ISM2Q6H9L7 571 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 XXYLT1Q8NBI6 393 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 ZMAT2Q96NC0 199 aaKnown RBP32.13■■■□□ 2.73
HOXB3-208ENST00000476342 ASB7Q9H672 318 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 TRAF3IP3Q9Y228 551 aa32.13■■■□□ 2.73
HOXB3-208ENST00000476342 TRANK1O15050 2925 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 LACTBL1A8MY62 500 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 NT5C1B-RDH14C9J2C7 533 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 RFXAPO00287 272 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 BIN1O00499 593 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 NRP1O14786 923 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 IL18RAPO95256 599 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 KRT17Q04695 432 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 BRSK2Q8IWQ3 736 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 ZSWIM2Q8NEG5 633 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 KIF12Q96FN5 646 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 TMEM169Q96HH4 297 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 CDX2Q99626 313 aaPredicted RBP32.12■■■□□ 2.73
HOXB3-208ENST00000476342 RBAKQ9NYW8 714 aaPredicted RBP32.12■■■□□ 2.73
HOXB3-208ENST00000476342 PLXNA4Q9HCM2 1894 aa32.12■■■□□ 2.73
HOXB3-208ENST00000476342 ZNF233A6NK53 670 aa32.11■■■□□ 2.73
HOXB3-208ENST00000476342 XPOTO43592 962 aaKnown RBP32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms