RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 FAM196BA6NMK8 535 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 USP17L12C9JPN9 530 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 USP17L21D6R901 530 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 PYGMP11217 842 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 CETPP11597 493 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 HOXA10P31260 410 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-205ENST00000475993 GSTM4Q03013 218 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 DMPKQ09013 629 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 EDRF1Q3B7T1 1238 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 GRAMD4Q6IC98 578 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 RHBDF2Q6PJF5 856 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 MAP7D3Q8IWC1 876 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 TUBGCP5Q96RT8 1024 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 MIS12Q9H081 205 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 STK32BQ9NY57 414 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 MAD2L2Q9UI95 211 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-205ENST00000475993 FAM47DPA6NHR8 397 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 BOLA2-SMG1P6H3BVE0 249 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 EDF1O60869 148 aaKnown RBP11.24□□□□□ -0.61
ABCF1-205ENST00000475993 ZCCHC18P0CG32 403 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 TROVE2P10155 538 aaKnown RBP eCLIP11.24□□□□□ -0.61
ABCF1-205ENST00000475993 COILP38432 576 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-205ENST00000475993 DYNLL1P63167 89 aaKnown RBP11.24□□□□□ -0.61
ABCF1-205ENST00000475993 CALCOCO2Q13137 446 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 CTTNQ14247 550 aaKnown RBP11.24□□□□□ -0.61
ABCF1-205ENST00000475993 GRM4Q14833 912 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 TNIP1Q15025 636 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 EPHA7Q15375 998 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 CLPPQ16740 277 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-205ENST00000475993 EPM2AIP1Q7L775 607 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-205ENST00000475993 TMCO5AQ8N6Q1 288 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 DEPTORQ8TB45 409 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 SPOCK2Q92563 424 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 NUDT12Q9BQG2 462 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 SLCO1B3Q9NPD5 702 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 CYLDQ9NQC7 956 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 IL1RAPL1Q9NZN1 696 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 WHRNQ9P202 907 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 NAALADL1Q9UQQ1 740 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 WNK3Q9BYP7 1800 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 UMODL1Q5DID0 1318 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 PCDH11YQ9BZA8 1340 aa11.24□□□□□ -0.61
ABCF1-205ENST00000475993 MIF4GDA9UHW6 222 aaKnown RBP11.23□□□□□ -0.61
ABCF1-205ENST00000475993 PLSCR1O15162 318 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 MAGEB3O15480 346 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 CCDC22O60826 627 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 CDH16O75309 829 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 ASLP04424 464 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 ITGA2BP08514 1039 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 LMNB1P20700 586 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 RC3H1Q5TC82 1133 aaKnown RBP11.23□□□□□ -0.61
ABCF1-205ENST00000475993 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 KIF6Q6ZMV9 814 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 HS2ST1Q7LGA3 356 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 FRMD5Q7Z6J6 570 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 CCDC125Q86Z20 511 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 ANKRD35Q8N283 1001 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 SCFD1Q8WVM8 642 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 HAUS1Q96CS2 278 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 ARHGEF26Q96DR7 871 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 OLFM3Q96PB7 478 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 BTBD10Q9BSF8 475 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 EURLQ9NYK6 297 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 ZFP69BQ9UJL9 534 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 TMED5Q9Y3A6 229 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 PAPPAQ13219 1627 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 CACNA1SQ13698 1873 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 C2CD2LO14523 706 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 GSC2O15499 205 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 PDE8AO60658 829 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 PABPC4LP0CB38 370 aaKnown RBP11.23□□□□□ -0.61
ABCF1-205ENST00000475993 CHKAP35790 457 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 NEK3P51956 506 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 RBM26Q5T8P6 1007 aaKnown RBP11.23□□□□□ -0.61
ABCF1-205ENST00000475993 DAB2IPQ5VWQ8 1189 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 CLNKQ7Z7G1 428 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 GLYCTKQ8IVS8 523 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 CCDC105Q8IYK2 499 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 DENND1AQ8TEH3 1009 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 LENG1Q96BZ8 264 aaPredicted RBP11.23□□□□□ -0.61
ABCF1-205ENST00000475993 SYT11Q9BT88 431 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 COG5Q9UP83 839 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 PTPN22Q9Y2R2 807 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 HEY1Q9Y5J3 304 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 ALG6Q9Y672 507 aa11.23□□□□□ -0.61
ABCF1-205ENST00000475993 ABCB4P21439 1286 aa11.22□□□□□ -0.61
ABCF1-205ENST00000475993 HADHBP55084 474 aaKnown RBP11.22□□□□□ -0.61
ABCF1-205ENST00000475993 MTTPP55157 894 aa11.22□□□□□ -0.61
ABCF1-205ENST00000475993 CALCRLQ16602 461 aa11.22□□□□□ -0.61
ABCF1-205ENST00000475993 ZNF394Q53GI3 561 aa11.22□□□□□ -0.61
ABCF1-205ENST00000475993 MARK2Q7KZI7 788 aaKnown RBP11.22□□□□□ -0.61
ABCF1-205ENST00000475993 NME8Q8N427 588 aa11.22□□□□□ -0.61
ABCF1-205ENST00000475993 PNMA1Q8ND90 353 aa11.22□□□□□ -0.61
ABCF1-205ENST00000475993 CXorf38Q8TB03 319 aa11.22□□□□□ -0.61
ABCF1-205ENST00000475993 TBCKQ8TEA7 893 aa11.22□□□□□ -0.61
ABCF1-205ENST00000475993 SNX29Q8TEQ0 813 aa11.22□□□□□ -0.61
ABCF1-205ENST00000475993 KRT35Q92764 455 aa11.22□□□□□ -0.61
ABCF1-205ENST00000475993 TBK1Q9UHD2 729 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms