RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PPP1R10Q96QC0 940 aaKnown RBP7.74□□□□□ -1.17
HDAC3-207ENST00000475549 RPP25Q9BUL9 199 aaKnown RBP7.74□□□□□ -1.17
HDAC3-207ENST00000475549 C2orf40Q9H1Z8 148 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.74□□□□□ -1.17
HDAC3-207ENST00000475549 SH2B1Q9NRF2 756 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-207ENST00000475549 EPS15L1Q9UBC2 864 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 GDAQ9Y2T3 454 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 CFAP54Q96N23 3096 aa7.74□□□□□ -1.17
HDAC3-207ENST00000475549 SMIM28A0A1B0GU29 152 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 KRBA1A5PL33 1030 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 ANHXE9PGG2 379 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 I3L4J1 428 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 K7ERI5 159 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 GALR2O43603 387 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-207ENST00000475549 EIF5BO60841 1220 aaKnown RBP7.73□□□□□ -1.17
HDAC3-207ENST00000475549 HIP1RO75146 1068 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 ZMYND10O75800 440 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 FGFR3P22607 806 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 PROZP22891 400 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 EFNA5P52803 228 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 PEX3P56589 373 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 NTHL1P78549 312 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 UPP1Q16831 310 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 HAUS3Q68CZ6 603 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 ASTLQ6HA08 431 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-207ENST00000475549 CYP26C1Q6V0L0 522 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 CEP57Q86XR8 500 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 FAM184AQ8NB25 1140 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 SNX29Q8TEQ0 813 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 LRRC15Q8TF66 581 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 PIK3R5Q8WYR1 880 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 KIFAP3Q92845 792 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 ACSF2Q96CM8 615 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-207ENST00000475549 TMX3Q96JJ7 454 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 ZBTB45Q96K62 511 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-207ENST00000475549 ACO2Q99798 780 aaKnown RBP7.73□□□□□ -1.17
HDAC3-207ENST00000475549 PRRX2Q99811 253 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 NTPCRQ9BSD7 190 aaKnown RBP7.73□□□□□ -1.17
HDAC3-207ENST00000475549 TTPALQ9BTX7 342 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 TARS2Q9BW92 718 aaKnown RBP7.73□□□□□ -1.17
HDAC3-207ENST00000475549 PRKD2Q9BZL6 878 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 PLEKHA4Q9H4M7 779 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 GOLGA2P5Q9HBQ8 144 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.73□□□□□ -1.17
HDAC3-207ENST00000475549 ZDHHC7Q9NXF8 308 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 ARHGAP28Q9P2N2 729 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 DUSP12Q9UNI6 340 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 TNFSF13BQ9Y275 285 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 CLUHO75153 1309 aa7.73□□□□□ -1.17
HDAC3-207ENST00000475549 SF3B1O75533 1304 aaKnown RBP eCLIP7.73□□□□□ -1.17
HDAC3-207ENST00000475549 CCDC169A6NNP5 214 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 B3GAT3O94766 335 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 GBP2P32456 591 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-207ENST00000475549 PRPHP41219 470 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 BRCC3P46736 316 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 CLCN5P51795 746 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 NUBP1P53384 320 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 OSTNP61366 133 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 ATP2C1P98194 919 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-207ENST00000475549 GNL2Q13823 731 aaKnown RBP7.72□□□□□ -1.17
HDAC3-207ENST00000475549 RAB33AQ14088 237 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 PPP2R5AQ15172 486 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 PSMD5Q16401 504 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 DCAF4L1Q3SXM0 396 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 ARSHQ5FYA8 562 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 DCLRE1AQ6PJP8 1040 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 DTHD1Q6ZMT9 781 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 SIX5Q8N196 739 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 ITFG1Q8TB96 612 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 ATOH1Q92858 354 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-207ENST00000475549 IFT74Q96LB3 600 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 PLIN2Q99541 437 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 HAPLN2Q9GZV7 340 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 CDT1Q9H211 546 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 TMEM134Q9H6X4 195 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.72□□□□□ -1.17
HDAC3-207ENST00000475549 IGSF9Q9P2J2 1179 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 DPP7Q9UHL4 492 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 FBXW11Q9UKB1 542 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 NOL7Q9UMY1 257 aaKnown RBP7.72□□□□□ -1.17
HDAC3-207ENST00000475549 DNM3Q9UQ16 869 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 WDR87Q6ZQQ6 2873 aa7.72□□□□□ -1.17
HDAC3-207ENST00000475549 CACNA1HO95180 2353 aa7.71□□□□□ -1.17
HDAC3-207ENST00000475549 NPHP3-ACAD11A0A0J9YXS1 232 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 PROB1E7EW31 1015 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 TMEM189-UBE2V1I3L0A0 370 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 LAD1O00515 517 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 NRG2O14511 850 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-207ENST00000475549 SLC16A4O15374 487 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 CCL16O15467 120 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 TBC1D4O60343 1298 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 CFHP08603 1231 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 KCNE1P15382 129 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 AOC1P19801 751 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 GUCY2CP25092 1073 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 GJB2P29033 226 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 TKTP29401 623 aaKnown RBP7.71□□□□□ -1.18
HDAC3-207ENST00000475549 OR1D2P34982 312 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 GRM5P41594 1212 aa7.71□□□□□ -1.18
HDAC3-207ENST00000475549 SLC12A3P55017 1021 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms