RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 PRKCBP05771 671 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 KRT5P13647 590 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 CYP11B1P15538 503 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 CHRNB2P17787 502 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 TFDP1Q14186 410 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 SEZ6Q53EL9 994 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 GJC2Q5T442 439 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 EFCAB12Q6NXP0 572 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 ZBTB33Q86T24 672 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 RHOT2Q8IXI1 618 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 METTL13Q8N6R0 699 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 DHX38Q92620 1227 aaKnown RBP16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 PBKQ96KB5 322 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 PCDHB18PQ96TA0 734 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 CGRRF1Q99675 332 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 LRRC1Q9BTT6 524 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 SELENOOQ9BVL4 669 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 PLXNA1Q9UIW2 1896 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 TTLL13PA6NNM8 815 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 BUB1BO60566 1050 aaPredicted RBP16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 MMEP08473 750 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 DPP9Q86TI2 863 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 RNPEPQ9H4A4 650 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 RBM12Q9NTZ6 932 aaKnown RBP16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 AMFRQ9UKV5 643 aa16.54■□□□□ 0.24
RPUSD3-215ENST00000475470 PTPRJQ12913 1337 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 GZMAP12544 262 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 RNASE9P60153 205 aaKnown RBP16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 GPC5P78333 572 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 SPRYD7Q5W111 196 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 HDXQ7Z353 690 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 ZNF467Q7Z7K2 595 aaPredicted RBP16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 NT5DC3Q86UY8 548 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 NLRP4Q96MN2 994 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 ACO2Q99798 780 aaKnown RBP16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 STXBP5LQ9Y2K9 1186 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 ZMYND10O75800 440 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 LGALS2P05162 132 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 IGBP1P78318 339 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 FMO1Q01740 532 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 CDR2Q01850 454 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 MAP9Q49MG5 647 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 GPR142Q7Z601 462 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 PARK7Q99497 189 aaKnown RBP16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 RRAGCQ9HB90 399 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 PRDM4Q9UKN5 801 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 L1RE1Q9UN81 338 aa16.53■□□□□ 0.24
RPUSD3-215ENST00000475470 CNTNAP2Q9UHC6 1331 aa16.52■□□□□ 0.24
RPUSD3-215ENST00000475470 CEP104O60308 925 aa16.52■□□□□ 0.24
RPUSD3-215ENST00000475470 PHACTR2O75167 634 aa16.52■□□□□ 0.24
RPUSD3-215ENST00000475470 CLSTN1O94985 981 aa16.52■□□□□ 0.24
RPUSD3-215ENST00000475470 ZBTB48P10074 688 aaPredicted RBP16.52■□□□□ 0.24
RPUSD3-215ENST00000475470 PLA2G4AP47712 749 aa16.52■□□□□ 0.24
RPUSD3-215ENST00000475470 CLCN3P51790 818 aa16.52■□□□□ 0.24
RPUSD3-215ENST00000475470 ZNF668Q96K58 619 aaPredicted RBP16.52■□□□□ 0.24
RPUSD3-215ENST00000475470 CTTNBP2NLQ9P2B4 639 aa16.52■□□□□ 0.24
RPUSD3-215ENST00000475470 RBM47A0AV96 593 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 INO80B-WBP1J3KQ70 363 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 ASAP2O43150 1006 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 VNN1O95497 513 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 GJB1P08034 283 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 ADCYAP1R1P41586 468 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 TMEM132AQ24JP5 1023 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 ZNF484Q5JVG2 852 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 C8orf74Q6P047 294 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 BRSK2Q8IWQ3 736 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 PPTC7Q8NI37 304 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 ZBTB10Q96DT7 871 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 CALR3Q96L12 384 aaKnown RBP16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 INO80BQ9C086 356 aaPredicted RBP16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 COG5Q9UP83 839 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 TNFSF9P41273 254 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 SPOPLQ6IQ16 392 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 MAMDC4Q6UXC1 1216 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 USP38Q8NB14 1042 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 HDAC7Q8WUI4 952 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 AFG1LQ8WV93 481 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 HES6Q96HZ4 224 aa16.51■□□□□ 0.23
RPUSD3-215ENST00000475470 MAP2K7O14733 419 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 OGTO15294 1046 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 C22orf31O95567 290 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 INSRRP14616 1297 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 DMTNQ08495 405 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 GLE1Q53GS7 698 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 CCNI2Q6ZMN8 369 aaPredicted RBP16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 OR5B17Q8NGF7 314 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 ACTRT1Q8TDG2 376 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 DDX1Q92499 740 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 RUBCNQ92622 972 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 PTPN18Q99952 460 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 ACKR2O00590 384 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 FAM189A1O60320 539 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 SNAI1O95863 264 aaPredicted RBP16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 AP3M2P53677 418 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 HADHBP55084 474 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 MRPS25P82663 173 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 SLC7A5Q01650 507 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 MCL1Q07820 350 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 GRB14Q14449 540 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms