RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 DNAJC19Q96DA6 116 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 SNX27Q96L92 541 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 ACAP3Q96P50 834 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 MRPL17Q9NRX2 175 aaKnown RBP17.51■□□□□ 0.39
ITGB1-210ENST00000474568 TOPORSQ9NS56 1045 aaPredicted RBP17.51■□□□□ 0.39
ITGB1-210ENST00000474568 ADAM28Q9UKQ2 775 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 PCDHA7Q9UN72 937 aa17.51■□□□□ 0.39
ITGB1-210ENST00000474568 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-210ENST00000474568 SMIM28A0A1B0GU29 152 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 MEFVO15553 781 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-210ENST00000474568 SRGAP2BP0DMP2 458 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 MYBP10242 640 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 EPCAMP16422 314 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 IGFBP6P24592 240 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-210ENST00000474568 KLRC2P26717 231 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 SSTR3P32745 418 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-210ENST00000474568 GLUD2P49448 558 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 MCL1Q07820 350 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 BECN1Q14457 450 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 KIAA1841Q6NSI8 718 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 ANKRD54Q6NXT1 300 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 ZMAT2Q96NC0 199 aaKnown RBP17.5■□□□□ 0.39
ITGB1-210ENST00000474568 KLHL5Q96PQ7 755 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 PPP1R10Q96QC0 940 aaKnown RBP17.5■□□□□ 0.39
ITGB1-210ENST00000474568 IKZF4Q9H2S9 585 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 CFAP45Q9UL16 551 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 FAM50BQ9Y247 325 aa17.5■□□□□ 0.39
ITGB1-210ENST00000474568 USP15Q9Y4E8 981 aaPredicted RBP17.5■□□□□ 0.39
ITGB1-210ENST00000474568 TTC28Q96AY4 2481 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 TISP43B9A030 160 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 CNPP09543 421 aaKnown RBP17.49■□□□□ 0.39
ITGB1-210ENST00000474568 TNFSF9P41273 254 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 SOX4Q06945 474 aaPredicted RBP17.49■□□□□ 0.39
ITGB1-210ENST00000474568 SPAG1Q07617 926 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 COASYQ13057 564 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 KCNC3Q14003 757 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 E2F4Q16254 413 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 HERC4Q5GLZ8 1057 aaPredicted RBP17.49■□□□□ 0.39
ITGB1-210ENST00000474568 ZBTB41Q5SVQ8 909 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 KANK3Q6NY19 840 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 CEP57Q86XR8 500 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 GLYCTKQ8IVS8 523 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 TMEM130Q8N3G9 435 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 C12orf76Q8N812 135 aaPredicted RBP17.49■□□□□ 0.39
ITGB1-210ENST00000474568 SMRP1Q8NCR6 262 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 CASP10Q92851 521 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 EMILIN2Q9BXX0 1053 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 MRPL44Q9H9J2 332 aaKnown RBP17.49■□□□□ 0.39
ITGB1-210ENST00000474568 CD320Q9NPF0 282 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 CDH22Q9UJ99 828 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 IRAK3Q9Y616 596 aa17.49■□□□□ 0.39
ITGB1-210ENST00000474568 CUL9Q8IWT3 2517 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 FSD2A1L4K1 749 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 SPDYE4A6NLX3 237 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 ANKRD63C9JTQ0 380 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 LILRB3O75022 631 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 CXCL8P10145 99 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 CLCNKBP51801 687 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 GTF2BQ00403 316 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 SMAD2Q15796 467 aaKnown RBP17.48■□□□□ 0.39
ITGB1-210ENST00000474568 SLC10A6Q3KNW5 377 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 ATL3Q6DD88 541 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 SLC39A4Q6P5W5 647 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 SYCE2Q6PIF2 218 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 ALKAL1Q6UXT8 129 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 MAP4K3Q8IVH8 894 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 RNF168Q8IYW5 571 aaPredicted RBP17.48■□□□□ 0.39
ITGB1-210ENST00000474568 RIN2Q8WYP3 895 aaPredicted RBP17.48■□□□□ 0.39
ITGB1-210ENST00000474568 C18orf25Q96B23 403 aaPredicted RBP17.48■□□□□ 0.39
ITGB1-210ENST00000474568 FGFBP2Q9BYJ0 223 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 PANK4Q9NVE7 773 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 FAM13BQ9NYF5 915 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 STK39Q9UEW8 545 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 RCOR1Q9UKL0 485 aa17.48■□□□□ 0.39
ITGB1-210ENST00000474568 SF3B1O75533 1304 aaKnown RBP eCLIP17.47■□□□□ 0.392e-9■■■■■ 80.4
ITGB1-210ENST00000474568 TULP1O00294 542 aaPredicted RBP17.47■□□□□ 0.39
ITGB1-210ENST00000474568 POLR2DO15514 142 aaKnown RBP17.47■□□□□ 0.39
ITGB1-210ENST00000474568 B3GAT3O94766 335 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 GCNT3O95395 438 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 EFEMP2O95967 443 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 PIGRP01833 764 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 WEE2P0C1S8 567 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 GAP43P17677 238 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 RPL17P18621 184 aaKnown RBP17.47■□□□□ 0.39
ITGB1-210ENST00000474568 USP41Q3LFD5 358 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 XKR4Q5GH76 650 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 RARS2Q5T160 578 aaKnown RBP17.47■□□□□ 0.39
ITGB1-210ENST00000474568 FAM171A1Q5VUB5 890 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 KIAA0319Q5VV43 1072 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 PRSS55Q6UWB4 352 aaPredicted RBP17.47■□□□□ 0.39
ITGB1-210ENST00000474568 TMEM184AQ6ZMB5 413 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 ZNF720Q7Z2F6 126 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 GJD3Q8N144 294 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 IQUBQ8NA54 791 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 SLC22A17Q8WUG5 538 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 HPS3Q969F9 1004 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 FAM212AQ96EL1 285 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 MSTO1Q9BUK6 570 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 CNTN3Q9P232 1028 aa17.47■□□□□ 0.39
ITGB1-210ENST00000474568 MYH15Q9Y2K3 1946 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms