RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 GDPD2Q9HCC8 539 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 MARCH5Q9NX47 278 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 NR2E1Q9Y466 385 aa20.4■□□□□ 0.86
CCDC171-206ENST00000474193 CNPP09543 421 aaKnown RBP20.39■□□□□ 0.85
CCDC171-206ENST00000474193 MCF2P10911 925 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 GRM5P41594 1212 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 KARSQ15046 597 aaKnown RBP20.39■□□□□ 0.85
CCDC171-206ENST00000474193 ADALQ6DHV7 355 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 MPZL3Q6UWV2 235 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 ZBTB33Q86T24 672 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 GPR65Q8IYL9 337 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 MYCT1Q8N699 235 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 SLC22A17Q8WUG5 538 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 ACAP3Q96P50 834 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 VN1R3Q9BXE9 311 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 ZHX3Q9H4I2 956 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 SLC38A7Q9NVC3 462 aa20.39■□□□□ 0.85
CCDC171-206ENST00000474193 MYH11P35749 1972 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 MYH15Q9Y2K3 1946 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 CASTOR2A6NHX0 329 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 CLDN3O15551 220 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 TBCAO75347 108 aaKnown RBP20.38■□□□□ 0.85
CCDC171-206ENST00000474193 EPCAMP16422 314 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 PLCG1P19174 1290 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 DSG1Q02413 1049 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 RARS2Q5T160 578 aaKnown RBP20.38■□□□□ 0.85
CCDC171-206ENST00000474193 AXDND1Q5T1B0 1012 aaPredicted RBP20.38■□□□□ 0.85
CCDC171-206ENST00000474193 RRAGBQ5VZM2 374 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 PDXDC1Q6P996 788 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 CCDC73Q6ZRK6 1079 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 RNF135Q8IUD6 432 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 LARP4BQ92615 738 aaKnown RBP20.38■□□□□ 0.85
CCDC171-206ENST00000474193 RAD54LQ92698 747 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 FBXL18Q96ME1 805 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 UROC1Q96N76 676 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 GBP4Q96PP9 640 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 PARVGQ9HBI0 331 aa20.38■□□□□ 0.85
CCDC171-206ENST00000474193 TRAPPC3O43617 180 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 GPR37L1O60883 481 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 LILRB3O75022 631 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 TOM1L1O75674 476 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 GLUD1P00367 558 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 EDN1P05305 212 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 CLCN4P51793 760 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 OSTNP61366 133 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 MCM6Q14566 821 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 KIAA0319Q5VV43 1072 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 ZPBP2Q6X784 338 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 TAS1R1Q7RTX1 841 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 TMEM161BQ8NDZ6 487 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 RIN2Q8WYP3 895 aaPredicted RBP20.37■□□□□ 0.85
CCDC171-206ENST00000474193 PYM1Q9BRP8 204 aaKnown RBP20.37■□□□□ 0.85
CCDC171-206ENST00000474193 CDT1Q9H211 546 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 SFXN1Q9H9B4 322 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 PTPRHQ9HD43 1115 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 CHST7Q9NS84 486 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 STK17AQ9UEE5 414 aa20.37■□□□□ 0.85
CCDC171-206ENST00000474193 NPHP3-ACAD11A0A0J9YXS1 232 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 LOC730098B7Z3J9 87 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 PTGESO14684 152 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 C1RP00736 705 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 MAPTP10636 758 aaKnown RBP20.36■□□□□ 0.85
CCDC171-206ENST00000474193 HARSP12081 509 aaKnown RBP20.36■□□□□ 0.85
CCDC171-206ENST00000474193 CMA1P23946 247 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 CACNB1Q02641 598 aaPredicted RBP20.36■□□□□ 0.85
CCDC171-206ENST00000474193 KYAT1Q16773 422 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 ARSHQ5FYA8 562 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 RESP18Q5W5W9 173 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 DCLRE1AQ6PJP8 1040 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 SHC4Q6S5L8 630 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 USP49Q70CQ1 688 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 HAUS6Q7Z4H7 955 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 CEP57Q86XR8 500 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 RABGGTAQ92696 567 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 KHSRPQ92945 711 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCDC171-206ENST00000474193 DDX27Q96GQ7 796 aaKnown RBP20.36■□□□□ 0.85
CCDC171-206ENST00000474193 REEP2Q9BRK0 252 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 PANK2Q9BZ23 570 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 GPR62Q9BZJ7 368 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 RXFP1Q9HBX9 757 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 FNIP2Q9P278 1114 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 ANKFY1Q9P2R3 1169 aa20.36■□□□□ 0.85
CCDC171-206ENST00000474193 A0A1W2PQ27 194 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 A0A1W2PQ64 194 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 A0A1W2PQD8 194 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 TEX28O15482 410 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 TRAK2O60296 914 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 COL9A1P20849 921 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 STAT6P42226 847 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 LIG4P49917 911 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 NOLC1Q14978 699 aaKnown RBP eCLIP20.35■□□□□ 0.85
CCDC171-206ENST00000474193 FAM171A1Q5VUB5 890 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 SV2BQ7L1I2 683 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 TAS1R3Q7RTX0 852 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 RNF168Q8IYW5 571 aaPredicted RBP20.35■□□□□ 0.85
CCDC171-206ENST00000474193 C12orf76Q8N812 135 aaPredicted RBP20.35■□□□□ 0.85
CCDC171-206ENST00000474193 HDAC7Q8WUI4 952 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 LRFN3Q9BTN0 628 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 TTPALQ9BTX7 342 aa20.35■□□□□ 0.85
CCDC171-206ENST00000474193 BLOC1S4Q9NUP1 217 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms