RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 ZXDAP98168 799 aa21.82■■□□□ 1.08
TMEM54-204ENST00000474144 MCM6Q14566 821 aa21.82■■□□□ 1.08
TMEM54-204ENST00000474144 GPR149Q86SP6 731 aa21.82■■□□□ 1.08
TMEM54-204ENST00000474144 TCHPQ9BT92 498 aa21.82■■□□□ 1.08
TMEM54-204ENST00000474144 GOLGA2P5Q9HBQ8 144 aa21.82■■□□□ 1.08
TMEM54-204ENST00000474144 KCND2Q9NZV8 630 aa21.82■■□□□ 1.08
TMEM54-204ENST00000474144 NR2E1Q9Y466 385 aa21.82■■□□□ 1.08
TMEM54-204ENST00000474144 SF3B1O75533 1304 aaKnown RBP eCLIP21.81■■□□□ 1.08
TMEM54-204ENST00000474144 SMIM28A0A1B0GU29 152 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 K7ELQ4 463 aaPredicted RBP21.81■■□□□ 1.08
TMEM54-204ENST00000474144 MEFVO15553 781 aaPredicted RBP21.81■■□□□ 1.08
TMEM54-204ENST00000474144 SLC26A4O43511 780 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 GLUD1P00367 558 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 HARSP12081 509 aaKnown RBP21.81■■□□□ 1.08
TMEM54-204ENST00000474144 MARCKSP29966 332 aaPredicted RBP21.81■■□□□ 1.08
TMEM54-204ENST00000474144 CLCNKBP51801 687 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 STRN3Q13033 797 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 SEZ6Q53EL9 994 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 FAM171A1Q5VUB5 890 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 MPZL3Q6UWV2 235 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 CD300LGQ6UXG3 332 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 ALKAL1Q6UXT8 129 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 HFE2Q6ZVN8 426 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 USP49Q70CQ1 688 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 APBB1IPQ7Z5R6 666 aaPredicted RBP21.81■■□□□ 1.08
TMEM54-204ENST00000474144 GPBP1Q86WP2 473 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 CEP57Q86XR8 500 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 RAD54LQ92698 747 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 INTS4Q96HW7 963 aaKnown RBP21.81■■□□□ 1.08
TMEM54-204ENST00000474144 EPSTI1Q96J88 318 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 REEP2Q9BRK0 252 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 CCDC94Q9BW85 323 aaPredicted RBP21.81■■□□□ 1.08
TMEM54-204ENST00000474144 MTMR6Q9Y217 621 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 DENND4AQ7Z401 1863 aa21.81■■□□□ 1.08
TMEM54-204ENST00000474144 TGM5O43548 720 aa21.8■■□□□ 1.08
TMEM54-204ENST00000474144 MCF2P10911 925 aa21.8■■□□□ 1.08
TMEM54-204ENST00000474144 SMTNP53814 917 aa21.8■■□□□ 1.08
TMEM54-204ENST00000474144 YARSP54577 528 aaKnown RBP21.8■■□□□ 1.08
TMEM54-204ENST00000474144 CEBPZQ03701 1054 aaKnown RBP21.8■■□□□ 1.08
TMEM54-204ENST00000474144 SOX4Q06945 474 aaPredicted RBP21.8■■□□□ 1.08
TMEM54-204ENST00000474144 XKR4Q5GH76 650 aa21.8■■□□□ 1.08
TMEM54-204ENST00000474144 RASSF8Q8NHQ8 419 aa21.8■■□□□ 1.08
TMEM54-204ENST00000474144 ZMAT2Q96NC0 199 aaKnown RBP21.8■■□□□ 1.08
TMEM54-204ENST00000474144 FNIP2Q9P278 1114 aa21.8■■□□□ 1.08
TMEM54-204ENST00000474144 ANKFY1Q9P2R3 1169 aa21.8■■□□□ 1.08
TMEM54-204ENST00000474144 VWA8A3KMH1 1905 aa21.8■■□□□ 1.08
TMEM54-204ENST00000474144 RFPL2O75678 378 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 BRD1O95696 1058 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 NCKAP1LP55160 1127 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 PTPN21Q16825 1174 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 TRIM67Q6ZTA4 783 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 C3orf58Q8NDZ4 430 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 LNX1Q8TBB1 728 aaPredicted RBP21.79■■□□□ 1.08
TMEM54-204ENST00000474144 CLIC6Q96NY7 704 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 ACAP3Q96P50 834 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 TTPALQ9BTX7 342 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 HAPLN2Q9GZV7 340 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.79■■□□□ 1.08
TMEM54-204ENST00000474144 FBXO2Q9UK22 296 aaPredicted RBP21.79■■□□□ 1.08
TMEM54-204ENST00000474144 HCN4Q9Y3Q4 1203 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 TECTAO75443 2155 aa21.79■■□□□ 1.08
TMEM54-204ENST00000474144 MTCL1Q9Y4B5 1905 aaKnown RBP21.78■■□□□ 1.08
TMEM54-204ENST00000474144 CCDC195A0A1B0GUA6 201 aa21.78■■□□□ 1.08
TMEM54-204ENST00000474144 UPP1Q16831 310 aa21.78■■□□□ 1.08
TMEM54-204ENST00000474144 LILRA6Q6PI73 481 aa21.78■■□□□ 1.08
TMEM54-204ENST00000474144 HAUS6Q7Z4H7 955 aa21.78■■□□□ 1.08
TMEM54-204ENST00000474144 GPR65Q8IYL9 337 aa21.78■■□□□ 1.08
TMEM54-204ENST00000474144 SNX27Q96L92 541 aa21.78■■□□□ 1.08
TMEM54-204ENST00000474144 CCSER1Q9C0I3 900 aa21.78■■□□□ 1.08
TMEM54-204ENST00000474144 TOPORSQ9NS56 1045 aaPredicted RBP21.78■■□□□ 1.08
TMEM54-204ENST00000474144 LARSQ9P2J5 1176 aaKnown RBP21.78■■□□□ 1.08
TMEM54-204ENST00000474144 DAXXQ9UER7 740 aaPredicted RBP21.78■■□□□ 1.08
TMEM54-204ENST00000474144 KCNG1Q9UIX4 513 aa21.78■■□□□ 1.08
TMEM54-204ENST00000474144 ODF2LQ9ULJ1 636 aa21.78■■□□□ 1.08
TMEM54-204ENST00000474144 TMEM221A6NGB7 291 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 I3L4J1 428 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 M0R296 226 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 TOM1L1O75674 476 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 B3GAT3O94766 335 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 DCLRE1AQ6PJP8 1040 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 C15orf39Q6ZRI6 1047 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 MYCT1Q8N699 235 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 TDRD5Q8NAT2 981 aaKnown RBP21.77■■□□□ 1.08
TMEM54-204ENST00000474144 CMASQ8NFW8 434 aaPredicted RBP21.77■■□□□ 1.08
TMEM54-204ENST00000474144 CLSTN3Q9BQT9 956 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 SMOC2Q9H3U7 446 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 LIMD1Q9UGP4 676 aa21.77■■□□□ 1.08
TMEM54-204ENST00000474144 CITO14578 2027 aa21.77■■□□□ 1.07
TMEM54-204ENST00000474144 TMEM189-UBE2V1I3L0A0 370 aa21.76■■□□□ 1.07
TMEM54-204ENST00000474144 ADAM12O43184 909 aa21.76■■□□□ 1.07
TMEM54-204ENST00000474144 FAM13AO94988 1023 aa21.76■■□□□ 1.07
TMEM54-204ENST00000474144 ASGR2P07307 311 aa21.76■■□□□ 1.07
TMEM54-204ENST00000474144 BRCC3P46736 316 aa21.76■■□□□ 1.07
TMEM54-204ENST00000474144 ZNF131P52739 623 aa21.76■■□□□ 1.07
TMEM54-204ENST00000474144 NOLC1Q14978 699 aaKnown RBP eCLIP21.76■■□□□ 1.07
TMEM54-204ENST00000474144 PSMD5Q16401 504 aa21.76■■□□□ 1.07
TMEM54-204ENST00000474144 ZPBP2Q6X784 338 aa21.76■■□□□ 1.07
TMEM54-204ENST00000474144 TMEM130Q8N3G9 435 aa21.76■■□□□ 1.07
TMEM54-204ENST00000474144 KREMEN2Q8NCW0 462 aa21.76■■□□□ 1.07
TMEM54-204ENST00000474144 PIK3R5Q8WYR1 880 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms