RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 MTSS1LQ765P7 747 aa22.37■■□□□ 1.17
APP-215ENST00000474136 OTUD6AQ7L8S5 288 aa22.37■■□□□ 1.17
APP-215ENST00000474136 CEP57Q86XR8 500 aa22.37■■□□□ 1.17
APP-215ENST00000474136 IFNLR1Q8IU57 520 aaPredicted RBP22.37■■□□□ 1.17
APP-215ENST00000474136 ZBTB44Q8NCP5 570 aa22.37■■□□□ 1.17
APP-215ENST00000474136 HAS1Q92839 578 aa22.37■■□□□ 1.17
APP-215ENST00000474136 MIA3Q5JRA6 1907 aa22.36■■□□□ 1.17
APP-215ENST00000474136 KMT2BQ9UMN6 2715 aaPredicted RBP22.36■■□□□ 1.17
APP-215ENST00000474136 CASTOR2A6NHX0 329 aa22.36■■□□□ 1.17
APP-215ENST00000474136 PDCP20941 246 aa22.36■■□□□ 1.17
APP-215ENST00000474136 TARSP26639 723 aaKnown RBP22.36■■□□□ 1.17
APP-215ENST00000474136 MXD4Q14582 209 aaPredicted RBP22.36■■□□□ 1.17
APP-215ENST00000474136 NCAPH2Q6IBW4 605 aa22.36■■□□□ 1.17
APP-215ENST00000474136 HACE1Q8IYU2 909 aa22.36■■□□□ 1.17
APP-215ENST00000474136 NSUN7Q8NE18 718 aaKnown RBP22.36■■□□□ 1.17
APP-215ENST00000474136 LNX1Q8TBB1 728 aaPredicted RBP22.36■■□□□ 1.17
APP-215ENST00000474136 WASF1Q92558 559 aa22.36■■□□□ 1.17
APP-215ENST00000474136 TTPALQ9BTX7 342 aa22.36■■□□□ 1.17
APP-215ENST00000474136 OSBPL6Q9BZF3 934 aa22.36■■□□□ 1.17
APP-215ENST00000474136 HCFC1R1Q9NWW0 138 aa22.36■■□□□ 1.17
APP-215ENST00000474136 ZSCAN32Q9NX65 697 aa22.36■■□□□ 1.17
APP-215ENST00000474136 KCNJ14Q9UNX9 436 aa22.36■■□□□ 1.17
APP-215ENST00000474136 SF3B1O75533 1304 aaKnown RBP eCLIP22.36■■□□□ 1.17
APP-215ENST00000474136 TDRD15B5MCY1 1934 aaKnown RBP22.36■■□□□ 1.17
APP-215ENST00000474136 DCDC2BA2VCK2 349 aa22.35■■□□□ 1.17
APP-215ENST00000474136 ST3GAL1Q11201 340 aa22.35■■□□□ 1.17
APP-215ENST00000474136 PSMD5Q16401 504 aa22.35■■□□□ 1.17
APP-215ENST00000474136 FAM171A1Q5VUB5 890 aa22.35■■□□□ 1.17
APP-215ENST00000474136 KRT25Q7Z3Z0 450 aa22.35■■□□□ 1.17
APP-215ENST00000474136 FAM184AQ8NB25 1140 aa22.35■■□□□ 1.17
APP-215ENST00000474136 ING5Q8WYH8 240 aa22.35■■□□□ 1.17
APP-215ENST00000474136 PIK3R5Q8WYR1 880 aa22.35■■□□□ 1.17
APP-215ENST00000474136 PHF20Q9BVI0 1012 aa22.35■■□□□ 1.17
APP-215ENST00000474136 EPC1Q9H2F5 836 aa22.35■■□□□ 1.17
APP-215ENST00000474136 ZSWIM4Q9H7M6 989 aa22.35■■□□□ 1.17
APP-215ENST00000474136 STK36Q9NRP7 1315 aa22.35■■□□□ 1.17
APP-215ENST00000474136 LILRB5O75023 590 aa22.34■■□□□ 1.17
APP-215ENST00000474136 KIF4AO95239 1232 aa22.34■■□□□ 1.17
APP-215ENST00000474136 DEXIO95424 95 aa22.34■■□□□ 1.17
APP-215ENST00000474136 TGM1P22735 817 aa22.34■■□□□ 1.17
APP-215ENST00000474136 PFKPQ01813 784 aa22.34■■□□□ 1.17
APP-215ENST00000474136 TFDP1Q14186 410 aa22.34■■□□□ 1.17
APP-215ENST00000474136 ZBTB41Q5SVQ8 909 aa22.34■■□□□ 1.17
APP-215ENST00000474136 TPRG1Q6ZUI0 275 aa22.34■■□□□ 1.17
APP-215ENST00000474136 TPH2Q8IWU9 490 aa22.34■■□□□ 1.17
APP-215ENST00000474136 NPAS3Q8IXF0 933 aa22.34■■□□□ 1.17
APP-215ENST00000474136 GPR161Q8N6U8 529 aaKnown RBP22.34■■□□□ 1.17
APP-215ENST00000474136 SPRYD3Q8NCJ5 442 aa22.34■■□□□ 1.17
APP-215ENST00000474136 SLC7A14Q8TBB6 771 aa22.34■■□□□ 1.17
APP-215ENST00000474136 NELL1Q92832 810 aa22.34■■□□□ 1.17
APP-215ENST00000474136 CDV3Q9UKY7 258 aaKnown RBP22.34■■□□□ 1.17
APP-215ENST00000474136 USP18Q9UMW8 372 aa22.34■■□□□ 1.17
APP-215ENST00000474136 XYLBO75191 536 aa22.33■■□□□ 1.17
APP-215ENST00000474136 CTDNEP1O95476 244 aa22.33■■□□□ 1.17
APP-215ENST00000474136 SDHBP21912 280 aa22.33■■□□□ 1.17
APP-215ENST00000474136 GLRA2P23416 452 aa22.33■■□□□ 1.17
APP-215ENST00000474136 GJB2P29033 226 aa22.33■■□□□ 1.17
APP-215ENST00000474136 HOXA9P31269 272 aa22.33■■□□□ 1.17
APP-215ENST00000474136 POU5F1BQ06416 359 aa22.33■■□□□ 1.17
APP-215ENST00000474136 SPIRE1Q08AE8 756 aa22.33■■□□□ 1.17
APP-215ENST00000474136 SLC27A1Q6PCB7 646 aa22.33■■□□□ 1.17
APP-215ENST00000474136 RSPO2Q6UXX9 243 aaPredicted RBP22.33■■□□□ 1.17
APP-215ENST00000474136 NEK8Q86SG6 692 aa22.33■■□□□ 1.17
APP-215ENST00000474136 POTEDQ86YR6 584 aa22.33■■□□□ 1.17
APP-215ENST00000474136 CLDN23Q96B33 292 aa22.33■■□□□ 1.17
APP-215ENST00000474136 BORCS6Q96GS4 357 aa22.33■■□□□ 1.17
APP-215ENST00000474136 PLA2G2FQ9BZM2 168 aa22.33■■□□□ 1.17
APP-215ENST00000474136 CXCL16Q9H2A7 254 aa22.33■■□□□ 1.17
APP-215ENST00000474136 PARD6AQ9NPB6 346 aa22.33■■□□□ 1.17
APP-215ENST00000474136 DNMT3BQ9UBC3 853 aaKnown RBP22.33■■□□□ 1.17
APP-215ENST00000474136 CIZ1Q9ULV3 898 aaPredicted RBP22.33■■□□□ 1.17
APP-215ENST00000474136 PATJQ8NI35 1801 aa22.33■■□□□ 1.17
APP-215ENST00000474136 A0A1B0GUA9 196 aa22.32■■□□□ 1.16
APP-215ENST00000474136 CCNT1O60563 726 aaKnown RBP22.32■■□□□ 1.16
APP-215ENST00000474136 ARL2P36404 184 aa22.32■■□□□ 1.16
APP-215ENST00000474136 MAGEA9P43362 315 aa22.32■■□□□ 1.16
APP-215ENST00000474136 LMNB2Q03252 620 aa22.32■■□□□ 1.16
APP-215ENST00000474136 TUSC3Q13454 348 aa22.32■■□□□ 1.16
APP-215ENST00000474136 PPP4R3AQ6IN85 833 aa22.32■■□□□ 1.16
APP-215ENST00000474136 GALNT17Q6IS24 598 aa22.32■■□□□ 1.16
APP-215ENST00000474136 POTEHQ6S545 545 aa22.32■■□□□ 1.16
APP-215ENST00000474136 SECISBP2LQ93073 1101 aaKnown RBP22.32■■□□□ 1.16
APP-215ENST00000474136 FOXD4L1Q9NU39 408 aa22.32■■□□□ 1.16
APP-215ENST00000474136 ORC3Q9UBD5 711 aaPredicted RBP22.32■■□□□ 1.16
APP-215ENST00000474136 CCDC194A0A1B0GVG4 234 aa22.31■■□□□ 1.16
APP-215ENST00000474136 SHISA7A6NL88 538 aa22.31■■□□□ 1.16
APP-215ENST00000474136 PRR5-ARHGAP8B1AHC4 643 aa22.31■■□□□ 1.16
APP-215ENST00000474136 MARCH6O60337 910 aa22.31■■□□□ 1.16
APP-215ENST00000474136 SLITRK3O94933 977 aa22.31■■□□□ 1.16
APP-215ENST00000474136 ARHGAP8P85298 464 aa22.31■■□□□ 1.16
APP-215ENST00000474136 FZD5Q13467 585 aa22.31■■□□□ 1.16
APP-215ENST00000474136 PABPC1LQ4VXU2 614 aaKnown RBP22.31■■□□□ 1.16
APP-215ENST00000474136 AXDND1Q5T1B0 1012 aaPredicted RBP22.31■■□□□ 1.16
APP-215ENST00000474136 HEBP1Q9NRV9 189 aa22.31■■□□□ 1.16
APP-215ENST00000474136 PTGESO14684 152 aa22.31■■□□□ 1.16
APP-215ENST00000474136 TBX3O15119 743 aa22.31■■□□□ 1.16
APP-215ENST00000474136 GCFC2P16383 781 aaKnown RBP22.31■■□□□ 1.16
APP-215ENST00000474136 IGFBP6P24592 240 aaPredicted RBP22.31■■□□□ 1.16
APP-215ENST00000474136 FAM177A1Q8N128 213 aaPredicted RBP22.31■■□□□ 1.16
APP-215ENST00000474136 MCRS1Q96EZ8 462 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms