RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 PSMD5Q16401 504 aa27.31■■□□□ 1.96
PKD1-211ENST00000474088 DCAF4L1Q3SXM0 396 aa27.31■■□□□ 1.96
PKD1-211ENST00000474088 NT5DC1Q5TFE4 455 aa27.31■■□□□ 1.96
PKD1-211ENST00000474088 FBXW11Q9UKB1 542 aa27.31■■□□□ 1.96
PKD1-211ENST00000474088 CFHP08603 1231 aa27.3■■□□□ 1.96
PKD1-211ENST00000474088 NBL1P41271 181 aa27.3■■□□□ 1.96
PKD1-211ENST00000474088 ATF7IP2Q5U623 682 aa27.3■■□□□ 1.96
PKD1-211ENST00000474088 GET4Q7L5D6 327 aaPredicted RBP27.3■■□□□ 1.96
PKD1-211ENST00000474088 RTP3Q9BQQ7 232 aa27.3■■□□□ 1.96
PKD1-211ENST00000474088 SH2B1Q9NRF2 756 aaPredicted RBP27.3■■□□□ 1.96
PKD1-211ENST00000474088 DDX19AQ9NUU7 478 aaKnown RBP27.29■■□□□ 1.96
PKD1-211ENST00000474088 STK24Q9Y6E0 443 aa27.29■■□□□ 1.96
PKD1-211ENST00000474088 K7ERI5 159 aa27.28■■□□□ 1.96
PKD1-211ENST00000474088 SRFP11831 508 aa27.28■■□□□ 1.96
PKD1-211ENST00000474088 U2AF2P26368 475 aaKnown RBP eCLIP27.28■■□□□ 1.96
PKD1-211ENST00000474088 TOB1P50616 345 aaPredicted RBP27.28■■□□□ 1.96
PKD1-211ENST00000474088 PTGDRQ13258 359 aa27.28■■□□□ 1.96
PKD1-211ENST00000474088 PDXDC1Q6P996 788 aa27.28■■□□□ 1.96
PKD1-211ENST00000474088 IGSF22Q8N9C0 903 aa27.28■■□□□ 1.96
PKD1-211ENST00000474088 KIF2CQ99661 725 aa27.28■■□□□ 1.96
PKD1-211ENST00000474088 KRBA1A5PL33 1030 aa27.27■■□□□ 1.96
PKD1-211ENST00000474088 ANHXE9PGG2 379 aa27.27■■□□□ 1.96
PKD1-211ENST00000474088 ADAM12O43184 909 aa27.27■■□□□ 1.96
PKD1-211ENST00000474088 HNRNPA1P09651 372 aaKnown RBP eCLIP27.27■■□□□ 1.96
PKD1-211ENST00000474088 FSHRP23945 695 aa27.27■■□□□ 1.96
PKD1-211ENST00000474088 LIN9Q5TKA1 542 aa27.27■■□□□ 1.96
PKD1-211ENST00000474088 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.27■■□□□ 1.96
PKD1-211ENST00000474088 CCDC105Q8IYK2 499 aa27.27■■□□□ 1.96
PKD1-211ENST00000474088 SNX29Q8TEQ0 813 aa27.27■■□□□ 1.96
PKD1-211ENST00000474088 PPP1R10Q96QC0 940 aaKnown RBP27.27■■□□□ 1.96
PKD1-211ENST00000474088 RAB34Q9BZG1 259 aa27.27■■□□□ 1.96
PKD1-211ENST00000474088 TNFSF13BQ9Y275 285 aa27.27■■□□□ 1.96
PKD1-211ENST00000474088 PCDHB6Q9Y5E3 794 aa27.27■■□□□ 1.96
PKD1-211ENST00000474088 ZFP37Q9Y6Q3 630 aaPredicted RBP27.27■■□□□ 1.96
PKD1-211ENST00000474088 TMEM189-UBE2V1I3L0A0 370 aa27.26■■□□□ 1.95
PKD1-211ENST00000474088 FGFR3P22607 806 aa27.26■■□□□ 1.95
PKD1-211ENST00000474088 IGFBP6P24592 240 aaPredicted RBP27.26■■□□□ 1.95
PKD1-211ENST00000474088 GLRA4Q5JXX5 417 aa27.26■■□□□ 1.95
PKD1-211ENST00000474088 PPM1LQ5SGD2 360 aa27.26■■□□□ 1.95
PKD1-211ENST00000474088 DCLRE1AQ6PJP8 1040 aa27.26■■□□□ 1.95
PKD1-211ENST00000474088 APBB1IPQ7Z5R6 666 aaPredicted RBP27.26■■□□□ 1.95
PKD1-211ENST00000474088 GRASPQ7Z6J2 395 aaPredicted RBP27.26■■□□□ 1.95
PKD1-211ENST00000474088 CCDC169A6NNP5 214 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 E9PMD0 336 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 STK25O00506 426 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 B3GAT3O94766 335 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 C8AP07357 584 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 HOXA9P31269 272 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 CLCNKBP51801 687 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 HTR4Q13639 388 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 RAB33AQ14088 237 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 ASCL5Q7RTU5 278 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 DTWD2Q8NBA8 298 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 CA14Q9ULX7 337 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 DNM3Q9UQ16 869 aa27.25■■□□□ 1.95
PKD1-211ENST00000474088 OR1D2P34982 312 aa27.24■■□□□ 1.95
PKD1-211ENST00000474088 NPTX2P47972 431 aa27.24■■□□□ 1.95
PKD1-211ENST00000474088 PEX3P56589 373 aa27.24■■□□□ 1.95
PKD1-211ENST00000474088 NTHL1P78549 312 aa27.24■■□□□ 1.95
PKD1-211ENST00000474088 KRT79Q5XKE5 535 aa27.24■■□□□ 1.95
PKD1-211ENST00000474088 CD300LGQ6UXG3 332 aa27.24■■□□□ 1.95
PKD1-211ENST00000474088 GPR152Q8TDT2 470 aa27.24■■□□□ 1.95
PKD1-211ENST00000474088 UROC1Q96N76 676 aa27.24■■□□□ 1.95
PKD1-211ENST00000474088 ACO2Q99798 780 aaKnown RBP27.24■■□□□ 1.95
PKD1-211ENST00000474088 TMEM134Q9H6X4 195 aa27.24■■□□□ 1.95
PKD1-211ENST00000474088 NUMBLQ9Y6R0 609 aa27.24■■□□□ 1.95
PKD1-211ENST00000474088 PHLPP2Q6ZVD8 1323 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 SMIM28A0A1B0GU29 152 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 PP2D1A8MPX8 630 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 LAD1O00515 517 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 GRM5P41594 1212 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 IL17AQ16552 155 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 UPP1Q16831 310 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 UVSSAQ2YD98 709 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 ST13P5Q8NFI4 369 aaPredicted RBP27.23■■□□□ 1.95
PKD1-211ENST00000474088 PTPRHQ9HD43 1115 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 MTRRQ9UBK8 725 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 CDH7Q9ULB5 785 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 DOCK8Q8NF50 2099 aa27.23■■□□□ 1.95
PKD1-211ENST00000474088 PRR23AA6NEV1 266 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 CCL16O15467 120 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 HIP1RO75146 1068 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 XYLBO75191 536 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 YARSP54577 528 aaKnown RBP27.22■■□□□ 1.95
PKD1-211ENST00000474088 ANGPT1Q15389 498 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 AXDND1Q5T1B0 1012 aaPredicted RBP27.22■■□□□ 1.95
PKD1-211ENST00000474088 ALKAL1Q6UXT8 129 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 FRMD5Q7Z6J6 570 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 DAW1Q8N136 415 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 CEP120Q8N960 986 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 SLC7A14Q8TBB6 771 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 CCDC94Q9BW85 323 aaPredicted RBP27.22■■□□□ 1.95
PKD1-211ENST00000474088 CDT1Q9H211 546 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 GOLGA2P5Q9HBQ8 144 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 SLC2A4RGQ9NR83 387 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 TOPORSQ9NS56 1045 aaPredicted RBP27.22■■□□□ 1.95
PKD1-211ENST00000474088 POLIQ9UNA4 740 aa27.22■■□□□ 1.95
PKD1-211ENST00000474088 TRAPPC3O43617 180 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 RFX1P22670 979 aa27.21■■□□□ 1.95
PKD1-211ENST00000474088 CDC25AP30304 524 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms