RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CASTOR2A6NHX0 329 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 K7ENM7 598 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 PTGESO14684 152 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 XPOTO43592 962 aaKnown RBP22.41■■□□□ 1.18
SNX13-206ENST00000474067 TRAK2O60296 914 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 LILRB3O75022 631 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 PROZP22891 400 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 MARCKSP29966 332 aaPredicted RBP22.41■■□□□ 1.18
SNX13-206ENST00000474067 LIG4P49917 911 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 DHX8Q14562 1220 aaKnown RBP22.41■■□□□ 1.18
SNX13-206ENST00000474067 SLC39A14Q15043 492 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 HERC4Q5GLZ8 1057 aaPredicted RBP22.41■■□□□ 1.18
SNX13-206ENST00000474067 KIAA0319Q5VV43 1072 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 DCLRE1AQ6PJP8 1040 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 HAUS6Q7Z4H7 955 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 PLCD3Q8N3E9 789 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 RPGRIP1Q96KN7 1286 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 TSPAN18Q96SJ8 248 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 TTPALQ9BTX7 342 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 ZHX3Q9H4I2 956 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 ANKFY1Q9P2R3 1169 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 SEL1LQ9UBV2 794 aa22.41■■□□□ 1.18
SNX13-206ENST00000474067 EFEMP2O95967 443 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 ZNF131P52739 623 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 RBM10P98175 930 aaKnown RBP22.4■■□□□ 1.18
SNX13-206ENST00000474067 MCM6Q14566 821 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 STK38Q15208 465 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 RARS2Q5T160 578 aaKnown RBP22.4■■□□□ 1.18
SNX13-206ENST00000474067 SV2BQ7L1I2 683 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 ZBTB33Q86T24 672 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 RNF135Q8IUD6 432 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 PPP1R10Q96QC0 940 aaKnown RBP22.4■■□□□ 1.18
SNX13-206ENST00000474067 EPHX3Q9H6B9 360 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 PLEKHA5Q9HAU0 1116 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 FOXD4L1Q9NU39 408 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 FBXO2Q9UK22 296 aaPredicted RBP22.4■■□□□ 1.18
SNX13-206ENST00000474067 USTQ9Y2C2 406 aa22.4■■□□□ 1.18
SNX13-206ENST00000474067 PRR33A8MZF0 331 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 HNRNPDLO14979 420 aaKnown RBP22.39■■□□□ 1.17
SNX13-206ENST00000474067 B3GAT3O94766 335 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 EPCAMP16422 314 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 CEBPZQ03701 1054 aaKnown RBP22.39■■□□□ 1.17
SNX13-206ENST00000474067 MCL1Q07820 350 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 ARSHQ5FYA8 562 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 XKR4Q5GH76 650 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 ATL3Q6DD88 541 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.39■■□□□ 1.17
SNX13-206ENST00000474067 CMASQ8NFW8 434 aaPredicted RBP22.39■■□□□ 1.17
SNX13-206ENST00000474067 RIN2Q8WYP3 895 aaPredicted RBP22.39■■□□□ 1.17
SNX13-206ENST00000474067 STAMQ92783 540 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 ACSF2Q96CM8 615 aaPredicted RBP22.39■■□□□ 1.17
SNX13-206ENST00000474067 HVCN1Q96D96 273 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 RHOBTB2Q9BYZ6 727 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 BLOC1S4Q9NUP1 217 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 HCN4Q9Y3Q4 1203 aa22.39■■□□□ 1.17
SNX13-206ENST00000474067 SMIM28A0A1B0GU29 152 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 TEX28O15482 410 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 EDN1P05305 212 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 CLTAP09496 248 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 KCNE1P15382 129 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 RPL9P32969 192 aaKnown RBP22.38■■□□□ 1.17
SNX13-206ENST00000474067 NASPP49321 788 aaPredicted RBP22.38■■□□□ 1.17
SNX13-206ENST00000474067 FAM171A1Q5VUB5 890 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 TAS1R3Q7RTX0 852 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 PIK3R5Q8WYR1 880 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 SNX27Q96L92 541 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 APOL5Q9BWW9 433 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 GPR62Q9BZJ7 368 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 CNTN3Q9P232 1028 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 TBX20Q9UMR3 447 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 USP20Q9Y2K6 914 aa22.38■■□□□ 1.17
SNX13-206ENST00000474067 PPP6R2O75170 966 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 KIF4AO95239 1232 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 YEATS4O95619 227 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 PIGRP01833 764 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 HARSP12081 509 aaKnown RBP22.37■■□□□ 1.17
SNX13-206ENST00000474067 GAP43P17677 238 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 STAT6P42226 847 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 OSTNP61366 133 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 SLFN12LQ6IEE8 588 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 CCDC149Q6ZUS6 474 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 GPR149Q86SP6 731 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 CEP57Q86XR8 500 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 CD302Q8IX05 232 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 TDRD5Q8NAT2 981 aaKnown RBP22.37■■□□□ 1.17
SNX13-206ENST00000474067 EPSTI1Q96J88 318 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 USP28Q96RU2 1077 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 ST6GALNAC4Q9H4F1 302 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 MAN1C1Q9NR34 630 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 ZDHHC7Q9NXF8 308 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 EXOC7Q9UPT5 735 aa22.37■■□□□ 1.17
SNX13-206ENST00000474067 CACNB1Q02641 598 aaPredicted RBP22.36■■□□□ 1.17
SNX13-206ENST00000474067 GRIN1Q05586 938 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 PPP2R3AQ06190 1150 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 ALCAMQ13740 583 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 NAB2Q15742 525 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 GLRA4Q5JXX5 417 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 ALKAL1Q6UXT8 129 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 ANKS3Q6ZW76 656 aa22.36■■□□□ 1.17
SNX13-206ENST00000474067 RTL10Q7L3V2 364 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms