RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 VPS13AQ96RL7 3174 aa14.77□□□□□ -0.05
COPS7B-219ENST00000474042 PDCD11Q14690 1871 aaKnown RBP14.77□□□□□ -0.05
COPS7B-219ENST00000474042 MIA3Q5JRA6 1907 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 ADAM12O43184 909 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 EIF5BO60841 1220 aaKnown RBP14.76□□□□□ -0.05
COPS7B-219ENST00000474042 TRAPPC10P48553 1259 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 RBM25P49756 843 aaKnown RBP14.76□□□□□ -0.05
COPS7B-219ENST00000474042 FXR2P51116 673 aaKnown RBP eCLIP14.76□□□□□ -0.05
COPS7B-219ENST00000474042 ELAVL2Q12926 359 aaKnown RBP14.76□□□□□ -0.05
COPS7B-219ENST00000474042 ZNF174Q15697 407 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 ECM1Q16610 540 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 TTC38Q5R3I4 469 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 PDXDC1Q6P996 788 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.76□□□□□ -0.05
COPS7B-219ENST00000474042 CCDC83Q8IWF9 413 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 PPP1R10Q96QC0 940 aaKnown RBP14.76□□□□□ -0.05
COPS7B-219ENST00000474042 LLPHQ9BRT6 129 aaKnown RBP14.76□□□□□ -0.05
COPS7B-219ENST00000474042 KIFC3Q9BVG8 833 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 TBC1D17Q9HA65 648 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 SLC2A4RGQ9NR83 387 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 PPP4R2Q9NY27 417 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 CA14Q9ULX7 337 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 LIMCH1Q9UPQ0 1083 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 ZFP37Q9Y6Q3 630 aaPredicted RBP14.76□□□□□ -0.05
COPS7B-219ENST00000474042 NUMBLQ9Y6R0 609 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 CITO14578 2027 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 GVINP1Q7Z2Y8 2422 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 PTPRZ1P23471 2315 aaPredicted RBP14.76□□□□□ -0.05
COPS7B-219ENST00000474042 PATJQ8NI35 1801 aa14.76□□□□□ -0.05
COPS7B-219ENST00000474042 C8AP07357 584 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 FGFR3P22607 806 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 FSHRP23945 695 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 EFNA5P52803 228 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 TMEM132AQ24JP5 1023 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 NT5DC1Q5TFE4 455 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 LIN9Q5TKA1 542 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 PHLDB3Q6NSJ2 640 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 CEP57Q86XR8 500 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 C4orf32Q8N8J7 132 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 FBXO18Q8NFZ0 1043 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 GPR152Q8TDT2 470 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 KIFAP3Q92845 792 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 NKD2Q969F2 451 aaPredicted RBP14.75□□□□□ -0.05
COPS7B-219ENST00000474042 ARHGEF3Q9NR81 526 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 MTRRQ9UBK8 725 aa14.75□□□□□ -0.05
COPS7B-219ENST00000474042 COL4A3Q01955 1670 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 PHLPP2Q6ZVD8 1323 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 SEC24BO95487 1268 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 LIG1P18858 919 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 CCT6AP40227 531 aaKnown RBP14.74□□□□□ -0.05
COPS7B-219ENST00000474042 NTHL1P78549 312 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 HMGN5P82970 282 aaKnown RBP14.74□□□□□ -0.05
COPS7B-219ENST00000474042 RAB33AQ14088 237 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 GLRA4Q5JXX5 417 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 PPM1LQ5SGD2 360 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 ATF7IP2Q5U623 682 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 GRASPQ7Z6J2 395 aaPredicted RBP14.74□□□□□ -0.05
COPS7B-219ENST00000474042 IGSF22Q8N9C0 903 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 SNX27Q96L92 541 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 IFT74Q96LB3 600 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 BHMT2Q9H2M3 363 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 DLGAP2Q9P1A6 1054 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 CDH7Q9ULB5 785 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 GDAQ9Y2T3 454 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 SPTBN4Q9H254 2564 aa14.74□□□□□ -0.05
COPS7B-219ENST00000474042 IGFBP6P24592 240 aaPredicted RBP14.73□□□□□ -0.05
COPS7B-219ENST00000474042 NBR1Q14596 966 aa14.73□□□□□ -0.05
COPS7B-219ENST00000474042 CD300LGQ6UXG3 332 aa14.73□□□□□ -0.05
COPS7B-219ENST00000474042 DAW1Q8N136 415 aa14.73□□□□□ -0.05
COPS7B-219ENST00000474042 C3orf58Q8NDZ4 430 aa14.73□□□□□ -0.05
COPS7B-219ENST00000474042 SLC7A14Q8TBB6 771 aa14.73□□□□□ -0.05
COPS7B-219ENST00000474042 FGF14Q92915 247 aa14.73□□□□□ -0.05
COPS7B-219ENST00000474042 UROC1Q96N76 676 aa14.73□□□□□ -0.05
COPS7B-219ENST00000474042 TNFSF13BQ9Y275 285 aa14.73□□□□□ -0.05
COPS7B-219ENST00000474042 MYH11P35749 1972 aa14.73□□□□□ -0.05
COPS7B-219ENST00000474042 CCL16O15467 120 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 XYLBO75191 536 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 B3GAT3O94766 335 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 OR1D2P34982 312 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 GRM5P41594 1212 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 CLCNKBP51801 687 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 UPP1Q16831 310 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 XKR4Q5GH76 650 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 AXDND1Q5T1B0 1012 aaPredicted RBP14.72□□□□□ -0.05
COPS7B-219ENST00000474042 ERICH6BQ5W0A0 696 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 DCLRE1AQ6PJP8 1040 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 PARM1Q6UWI2 310 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 RSPO2Q6UXX9 243 aaPredicted RBP14.72□□□□□ -0.05
COPS7B-219ENST00000474042 RTL10Q7L3V2 364 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 APBB1IPQ7Z5R6 666 aaPredicted RBP14.72□□□□□ -0.05
COPS7B-219ENST00000474042 CEP120Q8N960 986 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 ITFG1Q8TB96 612 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 FGF13Q92913 245 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 DDX27Q96GQ7 796 aaKnown RBP14.72□□□□□ -0.05
COPS7B-219ENST00000474042 RPP25Q9BUL9 199 aaKnown RBP14.72□□□□□ -0.05
COPS7B-219ENST00000474042 CDT1Q9H211 546 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 GOLGA2P5Q9HBQ8 144 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 POLD4Q9HCU8 107 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 PTPRHQ9HD43 1115 aa14.72□□□□□ -0.05
COPS7B-219ENST00000474042 DDX19AQ9NUU7 478 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms