RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 THNSL1Q8IYQ7 743 aa19.43■□□□□ 0.7
VARS2-206ENST00000473916 FAM71AQ8IYT1 594 aa19.43■□□□□ 0.7
VARS2-206ENST00000473916 TMEM130Q8N3G9 435 aa19.43■□□□□ 0.7
VARS2-206ENST00000473916 TRIM58Q8NG06 486 aa19.43■□□□□ 0.7
VARS2-206ENST00000473916 SHC3Q92529 594 aa19.43■□□□□ 0.7
VARS2-206ENST00000473916 CGRRF1Q99675 332 aa19.43■□□□□ 0.7
VARS2-206ENST00000473916 GPBP1L1Q9HC44 474 aaPredicted RBP19.43■□□□□ 0.7
VARS2-206ENST00000473916 DAAM1Q9Y4D1 1078 aa19.43■□□□□ 0.7
VARS2-206ENST00000473916 COL1A2P08123 1366 aa19.43■□□□□ 0.7
VARS2-206ENST00000473916 MAGEB2O15479 319 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 RGS2P41220 211 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 PIK3CAP42336 1068 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 INHBEP58166 350 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 BEX3Q00994 111 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 ENPEPQ07075 957 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 HIC1Q14526 733 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 TMEM132AQ24JP5 1023 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 ZNF568Q3ZCX4 644 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 TAF3Q5VWG9 929 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 MPZL3Q6UWV2 235 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 NOP9Q86U38 636 aaKnown RBP19.42■□□□□ 0.7
VARS2-206ENST00000473916 VPS36Q86VN1 386 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 LMBR1Q8WVP7 490 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 CPB2Q96IY4 423 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 CAPZA3Q96KX2 299 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 NOX5Q96PH1 765 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 APBA2Q99767 749 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 APOBEC3GQ9HC16 384 aaKnown RBP19.42■□□□□ 0.7
VARS2-206ENST00000473916 UMODL1Q5DID0 1318 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 OGTO15294 1046 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 PALMO75781 387 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 MFAP3P55082 362 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 CAP1Q01518 475 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 TMEM62Q0P6H9 643 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 SREBF2Q12772 1141 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 AMHR2Q16671 573 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 CCDC102AQ96A19 550 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 PSMB7Q99436 277 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 AGPAT1Q99943 283 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 GOLPH3Q9H4A6 298 aa19.42■□□□□ 0.7
VARS2-206ENST00000473916 LUC7LQ9NQ29 371 aaKnown RBP19.42■□□□□ 0.7
VARS2-206ENST00000473916 NOCTQ9UK39 431 aaKnown RBP19.42■□□□□ 0.7
VARS2-206ENST00000473916 CPSF3Q9UKF6 684 aaKnown RBP19.42■□□□□ 0.7
VARS2-206ENST00000473916 ASAP2O43150 1006 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 TBC1D8O95759 1140 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 IGHA2P01877 340 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 CHRNB2P17787 502 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 ANXA13P27216 316 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 PHKA2P46019 1235 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 TEX35Q5T0J7 233 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 RPUSD2Q8IZ73 545 aaKnown RBP19.41■□□□□ 0.7
VARS2-206ENST00000473916 KIAA0319LQ8IZA0 1049 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 EPS8L1Q8TE68 723 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 CDT1Q9H211 546 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 SAR1BQ9Y6B6 198 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 ANO9A1A5B4 782 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 GRID2IPA4D2P6 1211 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 EFCAB8A8MWE9 144 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 GPR25O00155 361 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 FTCDO95954 541 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 TNFAIP3P21580 790 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 FGFR4P22455 802 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 GALCP54803 685 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 PTPROQ16827 1216 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 NFRKBQ6P4R8 1299 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 SRGAP1Q7Z6B7 1085 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 TRPV1Q8NER1 839 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 NLRP7Q8WX94 980 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 ALS2CR12Q96Q35 445 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 PCDHB18PQ96TA0 734 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 MTMR12Q9C0I1 747 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 C1orf112Q9NSG2 853 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 JRKLQ9Y4A0 524 aa19.41■□□□□ 0.7
VARS2-206ENST00000473916 MEFVO15553 781 aaPredicted RBP19.4■□□□□ 0.7
VARS2-206ENST00000473916 F2P00734 622 aa19.4■□□□□ 0.7
VARS2-206ENST00000473916 H2AFZP0C0S5 128 aa19.4■□□□□ 0.7
VARS2-206ENST00000473916 SMIM10L2AP0DMW4 78 aa19.4■□□□□ 0.7
VARS2-206ENST00000473916 SMIM10L2BP0DMW5 78 aa19.4■□□□□ 0.7
VARS2-206ENST00000473916 TM4SF4P48230 202 aa19.4■□□□□ 0.7
VARS2-206ENST00000473916 C10orf76Q5T2E6 689 aa19.4■□□□□ 0.7
VARS2-206ENST00000473916 H2AFVQ71UI9 128 aa19.4■□□□□ 0.7
VARS2-206ENST00000473916 RSRC2Q7L4I2 434 aaKnown RBP19.4■□□□□ 0.7
VARS2-206ENST00000473916 TXLNBQ8N3L3 684 aa19.4■□□□□ 0.7
VARS2-206ENST00000473916 RNF10Q8N5U6 811 aaKnown RBP19.4■□□□□ 0.7
VARS2-206ENST00000473916 NFKBIZQ9BYH8 718 aa19.4■□□□□ 0.7
VARS2-206ENST00000473916 FAM49AQ9H0Q0 323 aaPredicted RBP19.4■□□□□ 0.7
VARS2-206ENST00000473916 GABRQQ9UN88 632 aa19.4■□□□□ 0.7
VARS2-206ENST00000473916 PACSIN2Q9UNF0 486 aaPredicted RBP19.4■□□□□ 0.7
VARS2-206ENST00000473916 CA12O43570 354 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 CCDC172P0C7W6 258 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 ABCB4P21439 1286 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 TMOD1P28289 359 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 CXCR5P32302 372 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 EFCAB13Q8IY85 973 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 COG1Q8WTW3 980 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 SOCS4Q8WXH5 440 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 UBXN4Q92575 508 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 TLR10Q9BXR5 811 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 TMEM88BA6NKF7 163 aa19.39■□□□□ 0.69
VARS2-206ENST00000473916 PDE2AO00408 941 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms