RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 C2orf42Q9NWW7 574 aa11.77□□□□□ -0.53
SSBP1-209ENST00000473783 MIOSQ9NXC5 875 aa11.77□□□□□ -0.53
SSBP1-209ENST00000473783 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
SSBP1-209ENST00000473783 RCAN3Q9UKA8 241 aa11.77□□□□□ -0.53
SSBP1-209ENST00000473783 ZMYM2Q9UBW7 1377 aa11.77□□□□□ -0.53
SSBP1-209ENST00000473783 ATG2BQ96BY7 2078 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 LNP1A1A4G5 178 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 E7EWF7 191 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 hCG_1984214I3L0E3 225 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 ARNTLO00327 626 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 ZNF263O14978 683 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 MAFO75444 373 aaPredicted RBP11.76□□□□□ -0.53
SSBP1-209ENST00000473783 MICAL2O94851 1124 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 SFNP31947 248 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 JAK3P52333 1124 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 GRIK3Q13003 919 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 RAB33AQ14088 237 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 XKR3Q5GH77 459 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 KIAA1211LQ6NV74 962 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 C19orf48Q6RUI8 117 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 VITQ6UXI7 678 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 TMTC3Q6ZXV5 915 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 KSR1Q8IVT5 923 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 TMTC2Q8N394 836 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 CCDC82Q8N4S0 544 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 ZNF713Q8N859 430 aaPredicted RBP11.76□□□□□ -0.53
SSBP1-209ENST00000473783 GLIS3Q8NEA6 775 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 C8orf33Q9H7E9 229 aaPredicted RBP11.76□□□□□ -0.53
SSBP1-209ENST00000473783 TMEM9BQ9NQ34 198 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 CACNA2D2Q9NY47 1150 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 GIT1Q9Y2X7 761 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 MYO18BQ8IUG5 2567 aa11.76□□□□□ -0.53
SSBP1-209ENST00000473783 UNC79Q9P2D8 2635 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 PI4KAP42356 2102 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 SPTA1P02549 2419 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 ZNF197O14709 1029 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 ADAM12O43184 909 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 CAPNS1P04632 268 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 PTPN2P17706 415 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 FGD1P98174 961 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 ELAVL2Q12926 359 aaKnown RBP11.75□□□□□ -0.53
SSBP1-209ENST00000473783 HSP90AA2PQ14568 343 aaPredicted RBP11.75□□□□□ -0.53
SSBP1-209ENST00000473783 ELF2Q15723 593 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 COL28A1Q2UY09 1125 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 PLK5Q496M5 336 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 WDR44Q5JSH3 913 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 PRSS36Q5K4E3 855 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 FAM171A1Q5VUB5 890 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 CEP57Q86XR8 500 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 MB21D2Q8IYB1 491 aaPredicted RBP11.75□□□□□ -0.53
SSBP1-209ENST00000473783 HACE1Q8IYU2 909 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 ADAM32Q8TC27 787 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 CSGALNACT1Q8TDX6 532 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 SMARCD2Q92925 531 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 CCDC51Q96ER9 411 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 BBC3Q96PG8 261 aaPredicted RBP11.75□□□□□ -0.53
SSBP1-209ENST00000473783 MINDY3Q9H8M7 445 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 KLK13Q9UKR3 277 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 COL4A3BPQ9Y5P4 624 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 ABCA7Q8IZY2 2146 aa11.75□□□□□ -0.53
SSBP1-209ENST00000473783 BCLAF3A2AJT9 711 aaKnown RBP11.74□□□□□ -0.53
SSBP1-209ENST00000473783 WDR27A2RRH5 827 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 FAM221BA6H8Z2 402 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 SMCO2A6NFE2 343 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 CCDC69A6NI79 296 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 ERLIN2O94905 339 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 CAVIN2O95810 425 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 RXRAP19793 462 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 AXLP30530 894 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 HOXC13P31276 330 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 OR1D2P34982 312 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 CCINQ13939 588 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 PCBP1Q15365 356 aaKnown RBP eCLIP11.74□□□□□ -0.53
SSBP1-209ENST00000473783 PRR16Q569H4 304 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 NOTUMQ6P988 496 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 CASC1Q6TDU7 716 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 NFXL1Q6ZNB6 911 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 RALGPS2Q86X27 583 aaPredicted RBP11.74□□□□□ -0.53
SSBP1-209ENST00000473783 MFSD6LQ8IWD5 586 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 GSTCDQ8NEC7 633 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 EIF2AQ9BY44 585 aaKnown RBP11.74□□□□□ -0.53
SSBP1-209ENST00000473783 TRPV4Q9HBA0 871 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 HES2Q9Y543 173 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 KIF26AQ9ULI4 1882 aaPredicted RBP11.74□□□□□ -0.53
SSBP1-209ENST00000473783 THADAQ6YHU6 1953 aa11.74□□□□□ -0.53
SSBP1-209ENST00000473783 ARHGEF37A1IGU5 675 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 MYBPHLA2RUH7 354 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 TMEM150BA6NC51 233 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 SLC38A8A6NNN8 435 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 H0Y626 953 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 NRG2O14511 850 aaPredicted RBP11.73□□□□□ -0.53
SSBP1-209ENST00000473783 EXTL3O43909 919 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 URB1O60287 2271 aaKnown RBP11.73□□□□□ -0.53
SSBP1-209ENST00000473783 RHOBTB1O94844 696 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 TRIM16O95361 564 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 LRG1P02750 347 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 CTHP32929 405 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 KPNA1P52294 538 aaPredicted RBP11.73□□□□□ -0.53
SSBP1-209ENST00000473783 CREB5Q02930 508 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 SPIRE1Q08AE8 756 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms