RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 AVENQ9NQS1 362 aaPredicted RBP18.05■□□□□ 0.48
HPS4-210ENST00000473782 BMP2KQ9NSY1 1161 aaPredicted RBP18.05■□□□□ 0.48
HPS4-210ENST00000473782 ZMIZ1Q9ULJ6 1067 aa18.05■□□□□ 0.48
HPS4-210ENST00000473782 KLF18A0A0U1RQI7 1052 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 MAN2B1O00754 1011 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 RHOP08100 348 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 ARF4P18085 180 aaPredicted RBP18.04■□□□□ 0.48
HPS4-210ENST00000473782 CXCL12P48061 93 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 GRIK3Q13003 919 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 SF3A2Q15428 464 aaKnown RBP18.04■□□□□ 0.48
HPS4-210ENST00000473782 NAB2Q15742 525 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 PRSS36Q5K4E3 855 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 CEP57Q86XR8 500 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 IFNLR1Q8IU57 520 aaPredicted RBP18.04■□□□□ 0.48
HPS4-210ENST00000473782 SLC7A3Q8WY07 619 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 CEP170P1Q96L14 293 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 TMEM121BQ9BXQ6 578 aaPredicted RBP18.04■□□□□ 0.48
HPS4-210ENST00000473782 XPNPEP1Q9NQW7 623 aa18.04■□□□□ 0.48
HPS4-210ENST00000473782 MRPS23Q9Y3D9 190 aaKnown RBP18.04■□□□□ 0.48
HPS4-210ENST00000473782 SDK1Q7Z5N4 2213 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 NCANO14594 1321 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 ZBTB39O15060 712 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 B4GALT5O43286 388 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 PRPF3O43395 683 aaKnown RBP18.03■□□□□ 0.48
HPS4-210ENST00000473782 RCAN1P53805 252 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 MBTD1Q05BQ5 628 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 ADCK5Q3MIX3 580 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 DHX32Q7L7V1 743 aaKnown RBP18.03■□□□□ 0.48
HPS4-210ENST00000473782 CDR2LQ86X02 465 aaPredicted RBP18.03■□□□□ 0.48
HPS4-210ENST00000473782 TBCKQ8TEA7 893 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 FAM3CQ92520 227 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 ZNF334Q9HCZ1 680 aaPredicted RBP18.03■□□□□ 0.48
HPS4-210ENST00000473782 TRPV5Q9NQA5 729 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 WASF3Q9UPY6 502 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 VWA8A3KMH1 1905 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 RALGAPA1Q6GYQ0 2036 aa18.03■□□□□ 0.48
HPS4-210ENST00000473782 CASTOR2A6NHX0 329 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 ARNTLO00327 626 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 ASAP2O43150 1006 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 ERLIN2O94905 339 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 PAPSS2O95340 614 aaPredicted RBP18.02■□□□□ 0.48
HPS4-210ENST00000473782 OR1D2P34982 312 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 RFC5P40937 340 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 QARSP47897 775 aaKnown RBP18.02■□□□□ 0.48
HPS4-210ENST00000473782 PPP2R5DQ14738 602 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 PCBP1Q15365 356 aaKnown RBP eCLIP18.02■□□□□ 0.48
HPS4-210ENST00000473782 FAM78AQ5JUQ0 283 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 IL31Q6EBC2 164 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.02■□□□□ 0.48
HPS4-210ENST00000473782 LONP2Q86WA8 852 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 KDF1Q8NAX2 398 aaPredicted RBP18.02■□□□□ 0.48
HPS4-210ENST00000473782 CCDC12Q8WUD4 166 aaPredicted RBP18.02■□□□□ 0.48
HPS4-210ENST00000473782 TCEAL4Q96EI5 215 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 VAV3Q9UKW4 847 aa18.02■□□□□ 0.48
HPS4-210ENST00000473782 M0R2N6 131 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 PTGESO14684 152 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 KCNK5O95279 499 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 CNR2P34972 360 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 CCR2P41597 374 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 TUSC3Q13454 348 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 EMC2Q15006 297 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 CCDC6Q16204 474 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 NTRK3Q16288 839 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 CD300LGQ6UXG3 332 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 VITQ6UXI7 678 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 RASEFQ8IZ41 740 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 SPEM1Q8N4L4 309 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 BICD2Q8TD16 824 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 ZSWIM3Q96MP5 696 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 LSM14BQ9BX40 385 aaKnown RBP18.01■□□□□ 0.47
HPS4-210ENST00000473782 BRD9Q9H8M2 597 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 RBM12Q9NTZ6 932 aaKnown RBP18.01■□□□□ 0.47
HPS4-210ENST00000473782 VPS54Q9P1Q0 977 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 MTRRQ9UBK8 725 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 PPME1Q9Y570 386 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 AKAP13Q12802 2813 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 ZMYM2Q9UBW7 1377 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 DMXL2Q8TDJ6 3036 aa18.01■□□□□ 0.47
HPS4-210ENST00000473782 A0A1B0GUA9 196 aa18■□□□□ 0.47
HPS4-210ENST00000473782 FOXD2O60548 495 aaPredicted RBP18■□□□□ 0.47
HPS4-210ENST00000473782 POU5F1BQ06416 359 aa18■□□□□ 0.47
HPS4-210ENST00000473782 PTGDRQ13258 359 aa18■□□□□ 0.47
HPS4-210ENST00000473782 UNQ6494/PRO21346Q6UXR6 183 aa18■□□□□ 0.47
HPS4-210ENST00000473782 RTL10Q7L3V2 364 aa18■□□□□ 0.47
HPS4-210ENST00000473782 ASAP3Q8TDY4 903 aa18■□□□□ 0.47
HPS4-210ENST00000473782 ASB16Q96NS5 453 aa18■□□□□ 0.47
HPS4-210ENST00000473782 ESYT1Q9BSJ8 1104 aa18■□□□□ 0.47
HPS4-210ENST00000473782 TRMT61BQ9BVS5 477 aaKnown RBP18■□□□□ 0.47
HPS4-210ENST00000473782 PIAS3Q9Y6X2 628 aa18■□□□□ 0.47
HPS4-210ENST00000473782 DSPP15924 2871 aaKnown RBP17.99■□□□□ 0.47
HPS4-210ENST00000473782 INO80B-WBP1J3KQ70 363 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 SLC37A4O43826 429 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 MOSPD3O75425 235 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 NPTXRO95502 500 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 ZNF806P0C7X5 589 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 FGFR3P22607 806 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 CCNE1P24864 410 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 PPP2R5CQ13362 524 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 CAPSQ13938 189 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 AASDHQ4L235 1098 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms