RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 ZNF568Q3ZCX4 644 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 KCNK18Q7Z418 384 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 CEP120Q8N960 986 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 STAMQ92783 540 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 PRRX2Q99811 253 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 TTPALQ9BTX7 342 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 RUSC1Q9BVN2 902 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 NT5C3AQ9H0P0 336 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 KCNK12Q9HB15 430 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 GOLGA2P5Q9HBQ8 144 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 KMT5AQ9NQR1 393 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
SMPD4-217ENST00000473720 FNIP2Q9P278 1114 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 POLIQ9UNA4 740 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 STK24Q9Y6E0 443 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 ZMYM2Q9UBW7 1377 aa13.14□□□□□ -0.31
SMPD4-217ENST00000473720 PHLPP2Q6ZVD8 1323 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 ZNF638Q14966 1978 aaKnown RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 VWA3AA6NCI4 1184 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 STK25O00506 426 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 SLC16A4O15374 487 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 NARSO43776 548 aaKnown RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 CD2BP2O95400 341 aaKnown RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 IGFBP6P24592 240 aaPredicted RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 NPTX2P47972 431 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 CLCNKBP51801 687 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 YARSP54577 528 aaKnown RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 CREMQ03060 361 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 TDGQ13569 410 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 RINT1Q6NUQ1 792 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 APBB1IPQ7Z5R6 666 aaPredicted RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 CMASQ8NFW8 434 aaPredicted RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 ATOH1Q92858 354 aaPredicted RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 MYADMQ96S97 322 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 TCHPQ9BT92 498 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 MMTAG2Q9BU76 263 aaKnown RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 TARS2Q9BW92 718 aaKnown RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 PLEKHA4Q9H4M7 779 aa13.13□□□□□ -0.31
SMPD4-217ENST00000473720 WDR6Q9NNW5 1121 aaKnown RBP13.13□□□□□ -0.31
SMPD4-217ENST00000473720 I3L4J1 428 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 LAD1O00515 517 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 CCL16O15467 120 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 ADAM12O43184 909 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 B3GAT3O94766 335 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 CFHP08603 1231 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 RFX1P22670 979 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 MATR3P43243 847 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMPD4-217ENST00000473720 CACNB1Q02641 598 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-217ENST00000473720 NAB2Q15742 525 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 LIN9Q5TKA1 542 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 DAW1Q8N136 415 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 TMEM105Q8N8V8 129 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 LNX1Q8TBB1 728 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-217ENST00000473720 ZNF707Q96C28 371 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-217ENST00000473720 CDK5RAP3Q96JB5 506 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 DRC1Q96MC2 740 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 ACO2Q99798 780 aaKnown RBP13.12□□□□□ -0.31
SMPD4-217ENST00000473720 CLSTN3Q9BQT9 956 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 CCDC94Q9BW85 323 aaPredicted RBP13.12□□□□□ -0.31
SMPD4-217ENST00000473720 MRPL4Q9BYD3 311 aaKnown RBP13.12□□□□□ -0.31
SMPD4-217ENST00000473720 PRKD2Q9BZL6 878 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 CDT1Q9H211 546 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 UPF2Q9HAU5 1272 aaKnown RBP13.12□□□□□ -0.31
SMPD4-217ENST00000473720 TNFSF13BQ9Y275 285 aa13.12□□□□□ -0.31
SMPD4-217ENST00000473720 ZMYND10O75800 440 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 C8AP07357 584 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 OR1D2P34982 312 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 PRPHP41219 470 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 BRCC3P46736 316 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 NTHL1P78549 312 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 ELAVL2Q12926 359 aaKnown RBP13.11□□□□□ -0.31
SMPD4-217ENST00000473720 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
SMPD4-217ENST00000473720 SEZ6Q53EL9 994 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 RILPL1Q5EBL4 403 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-217ENST00000473720 LILRA6Q6PI73 481 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 TAS1R3Q7RTX0 852 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 GRASPQ7Z6J2 395 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-217ENST00000473720 SIX5Q8N196 739 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 HDAC7Q8WUI4 952 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 PIK3R5Q8WYR1 880 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 ZBTB45Q96K62 511 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-217ENST00000473720 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
SMPD4-217ENST00000473720 ZDHHC7Q9NXF8 308 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 ANKFY1Q9P2R3 1169 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 CA14Q9ULX7 337 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 DUSP12Q9UNI6 340 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 SMC3Q9UQE7 1217 aa13.11□□□□□ -0.31
SMPD4-217ENST00000473720 NPHP3-ACAD11A0A0J9YXS1 232 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 SMIM28A0A1B0GU29 152 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 FSHRP23945 695 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 TKTP29401 623 aaKnown RBP13.1□□□□□ -0.31
SMPD4-217ENST00000473720 GRM5P41594 1212 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-217ENST00000473720 SOX4Q06945 474 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-217ENST00000473720 STRN3Q13033 797 aa13.1□□□□□ -0.31
SMPD4-217ENST00000473720 MAPK7Q13164 816 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms