RNA–Protein interactions for RNA: ENST00000473667.5

PDZD11-203, Transcript of PDZ domain containing 11, humanhuman

TSL 4

Gene PDZD11, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-203ENST00000473667 ATP2B1P20020 1258 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 PRKCQQ04759 706 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 ELAVL2Q12926 359 aaKnown RBP11.04□□□□□ -0.64
PDZD11-203ENST00000473667 PRPF4BQ13523 1007 aaKnown RBP11.04□□□□□ -0.64
PDZD11-203ENST00000473667 RAB33AQ14088 237 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 PUM1Q14671 1186 aaKnown RBP eCLIP11.04□□□□□ -0.64
PDZD11-203ENST00000473667 UBXN2BQ14CS0 331 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 NAB2Q15742 525 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 MLF2Q15773 248 aaPredicted RBP11.04□□□□□ -0.64
PDZD11-203ENST00000473667 FAM187BQ17R55 369 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 TMEM132AQ24JP5 1023 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 SLC44A4Q53GD3 710 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 AXDND1Q5T1B0 1012 aaPredicted RBP11.04□□□□□ -0.64
PDZD11-203ENST00000473667 CDCA2Q69YH5 1023 aaPredicted RBP11.04□□□□□ -0.64
PDZD11-203ENST00000473667 DCLK2Q8N568 766 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 MCPH1Q8NEM0 835 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 SLC7A14Q8TBB6 771 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 MTMR9Q96QG7 549 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 DDX23Q9BUQ8 820 aaKnown RBP11.04□□□□□ -0.64
PDZD11-203ENST00000473667 CXCL16Q9H2A7 254 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 PDZD7Q9H5P4 517 aa11.04□□□□□ -0.64
PDZD11-203ENST00000473667 SPATA6Q9NWH7 488 aaPredicted RBP11.04□□□□□ -0.64
PDZD11-203ENST00000473667 MTF2Q9Y483 593 aaPredicted RBP11.04□□□□□ -0.64
PDZD11-203ENST00000473667 FAM170BA6NMN3 283 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 BTBD18B2RXH4 712 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 WNT7AO00755 349 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 LAMTOR5O43504 91 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 POU2F2P09086 479 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 SPATA31C1P0DKV0 1188 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 LIG1P18858 919 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 OR1D2P34982 312 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 PFKPQ01813 784 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 MAPK6Q16659 721 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 UVSSAQ2YD98 709 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 ZNF528Q3MIS6 628 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 PABPC1LQ4VXU2 614 aaKnown RBP11.03□□□□□ -0.64
PDZD11-203ENST00000473667 RSPO2Q6UXX9 243 aaPredicted RBP11.03□□□□□ -0.64
PDZD11-203ENST00000473667 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.03□□□□□ -0.64
PDZD11-203ENST00000473667 CATSPER3Q86XQ3 398 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 NOSTRINQ8IVI9 506 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 SUMF1Q8NBK3 374 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 KXD1Q9BQD3 176 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 ADPGKQ9BRR6 497 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 OSBPL6Q9BZF3 934 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 C2orf40Q9H1Z8 148 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 TUFT1Q9NNX1 390 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 HCFC1R1Q9NWW0 138 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 DNMT3BQ9UBC3 853 aaKnown RBP11.03□□□□□ -0.64
PDZD11-203ENST00000473667 FBXO4Q9UKT5 387 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 USP20Q9Y2K6 914 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 COL4A3Q01955 1670 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 CACNA1HO95180 2353 aa11.03□□□□□ -0.64
PDZD11-203ENST00000473667 MTCL1Q9Y4B5 1905 aaKnown RBP11.02□□□□□ -0.65
PDZD11-203ENST00000473667 TMEM189-UBE2V1I3L0A0 370 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 ACKR2O00590 384 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 MED24O75448 989 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 B3GAT3O94766 335 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 PRKCBP05771 671 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 CD72P21854 359 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 FGFR3P22607 806 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 ANKRD1Q15327 319 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 NPAS3Q8IXF0 933 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 DIS3L2Q8IYB7 885 aaKnown RBP11.02□□□□□ -0.65
PDZD11-203ENST00000473667 NECAB1Q8N987 351 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 DEPTORQ8TB45 409 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 BSNDQ8WZ55 320 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 BORCS6Q96GS4 357 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 NACC1Q96RE7 527 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 CCDC113Q9H0I3 377 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 LTB4R2Q9NPC1 389 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 DLL3Q9NYJ7 618 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 MTRRQ9UBK8 725 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 KCNH3Q9ULD8 1083 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 GDAQ9Y2T3 454 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 CDY1Q9Y6F8 540 aa11.02□□□□□ -0.65
PDZD11-203ENST00000473667 SPTLC1O15269 473 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 ECI2O75521 394 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 EDN1P05305 212 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 CYP11B2P19099 503 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 IGFBP6P24592 240 aaPredicted RBP11.01□□□□□ -0.65
PDZD11-203ENST00000473667 MAGEA9P43362 315 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 NAMPTP43490 491 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 CLCNKBP51801 687 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 FOSBP53539 338 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 CSTF1Q05048 431 aaKnown RBP11.01□□□□□ -0.65
PDZD11-203ENST00000473667 TRIM29Q14134 588 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 GLRA4Q5JXX5 417 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 VARS2Q5ST30 1063 aaKnown RBP11.01□□□□□ -0.65
PDZD11-203ENST00000473667 ZBTB41Q5SVQ8 909 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 EEF1DP3Q658K8 133 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 PADI6Q6TGC4 694 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 RTL10Q7L3V2 364 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 ING5Q8WYH8 240 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 MCRS1Q96EZ8 462 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 NELL2Q99435 816 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 TMEM60Q9H2L4 133 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 NCDNQ9UBB6 729 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 MRPS23Q9Y3D9 190 aaKnown RBP11.01□□□□□ -0.65
PDZD11-203ENST00000473667 PCDHGA2Q9Y5H1 932 aa11.01□□□□□ -0.65
PDZD11-203ENST00000473667 BACE2Q9Y5Z0 518 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms