RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 KXD1Q9BQD3 176 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 TTPALQ9BTX7 342 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 NFKBIZQ9BYH8 718 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 FZD8Q9H461 694 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 ARHGEF3Q9NR81 526 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 ZDHHC7Q9NXF8 308 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 DLGAP2Q9P1A6 1054 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 FBXW11Q9UKB1 542 aa12.39□□□□□ -0.43
ACTB-209ENST00000473257 NRG2O14511 850 aaPredicted RBP12.38□□□□□ -0.43
ACTB-209ENST00000473257 C8AP07357 584 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 OR1D2P34982 312 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 PRPF4BQ13523 1007 aaKnown RBP12.38□□□□□ -0.43
ACTB-209ENST00000473257 PCBP1Q15365 356 aaKnown RBP eCLIP12.38□□□□□ -0.435e-27■■■■■ 34.2
ACTB-209ENST00000473257 PPM1LQ5SGD2 360 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 NT5DC1Q5TFE4 455 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 ELMSAN1Q6PJG2 1045 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 DCLRE1AQ6PJP8 1040 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 PADI6Q6TGC4 694 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 CD300LGQ6UXG3 332 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 PPP4R3CPQ6ZMV5 832 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 ZBTB8OSQ8IWT0 167 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 DCLK2Q8N568 766 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 CEP120Q8N960 986 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 SLC7A14Q8TBB6 771 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 FGF13Q92913 245 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 CCDC113Q9H0I3 377 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.38□□□□□ -0.43
ACTB-209ENST00000473257 PRMT7Q9NVM4 692 aaPredicted RBP12.38□□□□□ -0.43
ACTB-209ENST00000473257 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.38□□□□□ -0.435e-8■□□□□ 10.5
ACTB-209ENST00000473257 MYH15Q9Y2K3 1946 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 NOTCH4Q99466 2003 aa12.38□□□□□ -0.43
ACTB-209ENST00000473257 ARHGEF35A5YM69 484 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 PAPLNO95428 1278 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 SEC24BO95487 1268 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 THP07101 528 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 SP9P0CG40 484 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 TKTP29401 623 aaKnown RBP12.37□□□□□ -0.43
ACTB-209ENST00000473257 BRCC3P46736 316 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 ID4P47928 161 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 NEK4P51957 841 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 OSTNP61366 133 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 TRIM29Q14134 588 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 AXDND1Q5T1B0 1012 aaPredicted RBP12.37□□□□□ -0.43
ACTB-209ENST00000473257 LIN9Q5TKA1 542 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 CYP26C1Q6V0L0 522 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 KIAA2013Q8IYS2 634 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 MAML2Q8IZL2 1156 aaPredicted RBP12.37□□□□□ -0.43
ACTB-209ENST00000473257 C3orf58Q8NDZ4 430 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 DEPTORQ8TB45 409 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 HDAC7Q8WUI4 952 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 PIK3R5Q8WYR1 880 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 RHOBTB2Q9BYZ6 727 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 DPP7Q9UHL4 492 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 CDH7Q9ULB5 785 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 SIT1Q9Y3P8 196 aa12.37□□□□□ -0.43
ACTB-209ENST00000473257 TRIP11Q15643 1979 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 N4BP3O15049 544 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 CYP11B2P19099 503 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 CLCNKBP51801 687 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 SOX4Q06945 474 aaPredicted RBP12.36□□□□□ -0.43
ACTB-209ENST00000473257 ANKRD1Q15327 319 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 MAPK6Q16659 721 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 FAM187BQ17R55 369 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 SLC5A9Q2M3M2 681 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 CCDC83Q8IWF9 413 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 MCPH1Q8NEM0 835 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 PJA1Q8NG27 643 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 RMDN1Q96DB5 314 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 NACC1Q96RE7 527 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 PLA2G2FQ9BZM2 168 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 SLC2A4RGQ9NR83 387 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 DNMT3BQ9UBC3 853 aaKnown RBP12.36□□□□□ -0.43
ACTB-209ENST00000473257 CDY1Q9Y6F8 540 aa12.36□□□□□ -0.43
ACTB-209ENST00000473257 PP2D1A8MPX8 630 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 ACKR2O00590 384 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 B3GAT3O94766 335 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 LMNAP02545 664 aaKnown RBP12.35□□□□□ -0.43
ACTB-209ENST00000473257 OR52Z1P0C646 297 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 XRCC6P12956 609 aaKnown RBP eCLIP12.35□□□□□ -0.434e-22■□□□□ 8.8
ACTB-209ENST00000473257 FGFR3P22607 806 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 ARPP19P56211 112 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 UBXN2BQ14CS0 331 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 PHLDB3Q6NSJ2 640 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 C1orf210Q8IVY1 113 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 NPAS3Q8IXF0 933 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 NXPE3Q969Y0 559 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 MCRS1Q96EZ8 462 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 PRIMPOLQ96LW4 560 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 PPP1R10Q96QC0 940 aaKnown RBP12.35□□□□□ -0.43
ACTB-209ENST00000473257 POLR3CQ9BUI4 534 aaPredicted RBP12.35□□□□□ -0.43
ACTB-209ENST00000473257 BHMT2Q9H2M3 363 aa12.35□□□□□ -0.43
ACTB-209ENST00000473257 MED19A0JLT2 244 aaPredicted RBP12.34□□□□□ -0.43
ACTB-209ENST00000473257 MEFVO15553 781 aaPredicted RBP12.34□□□□□ -0.43
ACTB-209ENST00000473257 HNRNPA1P09651 372 aaKnown RBP eCLIP12.34□□□□□ -0.43
ACTB-209ENST00000473257 HARSP12081 509 aaKnown RBP12.34□□□□□ -0.43
ACTB-209ENST00000473257 CEBPBP17676 345 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 CCT6AP40227 531 aaKnown RBP12.34□□□□□ -0.43
ACTB-209ENST00000473257 NAMPTP43490 491 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 ANAPC15P60006 121 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms