RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 SASS6Q6UVJ0 657 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 NIPA1Q7RTP0 329 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 DGLUCYQ7Z3D6 616 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 RSPH3Q86UC2 560 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 GAS2L3Q86XJ1 694 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 CCDC105Q8IYK2 499 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 IQUBQ8NA54 791 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 SLC5A5Q92911 643 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 CALML4Q96GE6 196 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 MRGPRX2Q96LB1 330 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 FAM20AQ96MK3 541 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 CNTNAP3BQ96NU0 1288 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 PLIN2Q99541 437 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 MXRA8Q9BRK3 442 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 ZNF577Q9BSK1 485 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 FUCA2Q9BTY2 467 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 MMTAG2Q9BU76 263 aaKnown RBP7.06□□□□□ -1.28
HDAC1-205ENST00000472928 TEKT3Q9BXF9 490 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 CNTNAP3Q9BZ76 1288 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 CCSER1Q9C0I3 900 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 POMKQ9H5K3 350 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 PKD2L1Q9P0L9 805 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 CCDC39Q9UFE4 941 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 TUBE1Q9UJT0 475 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 VAV3Q9UKW4 847 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 PADI3Q9ULW8 664 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 NR2E1Q9Y466 385 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 UBIAD1Q9Y5Z9 338 aa7.06□□□□□ -1.28
HDAC1-205ENST00000472928 EVPLQ92817 2033 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 FNDC1Q4ZHG4 1894 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-205ENST00000472928 DDX39AO00148 427 aaKnown RBP7.05□□□□□ -1.28
HDAC1-205ENST00000472928 IPO5O00410 1097 aaKnown RBP7.05□□□□□ -1.28
HDAC1-205ENST00000472928 MEIS1O00470 390 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 BIN1O00499 593 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 MGEA5O60502 916 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 HOXB8P17481 243 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-205ENST00000472928 ITGB5P18084 799 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 AOC1P19801 751 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 CCT6AP40227 531 aaKnown RBP7.05□□□□□ -1.28
HDAC1-205ENST00000472928 AFMP43652 599 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 SARSP49591 514 aaKnown RBP7.05□□□□□ -1.28
HDAC1-205ENST00000472928 GDF10P55107 478 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 SP4Q02446 784 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 SPIRE1Q08AE8 756 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 ANGPT1Q15389 498 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 TMEM119Q4V9L6 283 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 PDE12Q6L8Q7 609 aaKnown RBP7.05□□□□□ -1.28
HDAC1-205ENST00000472928 KANK3Q6NY19 840 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 XRRA1Q6P2D8 792 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 COLGALT1Q8NBJ5 622 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 ERMNQ8TAM6 284 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 FEZF2Q8TBJ5 459 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 LRRC15Q8TF66 581 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 FTHL17Q9BXU8 183 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 FAM49AQ9H0Q0 323 aaPredicted RBP7.05□□□□□ -1.28
HDAC1-205ENST00000472928 ADAM7Q9H2U9 754 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 MAGEF1Q9HAY2 307 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 JADE2Q9NQC1 790 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 DLL3Q9NYJ7 618 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 STK17AQ9UEE5 414 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 TCEAL9Q9UHQ7 104 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 PCDHA12Q9UN75 941 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 PCDHB12Q9Y5F1 795 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 SQORQ9Y6N5 450 aa7.05□□□□□ -1.28
HDAC1-205ENST00000472928 IGSF9BQ9UPX0 1349 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 GSTTP1A0A1W2PQM5 241 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 TBKBP1A7MCY6 615 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 SLC26A4O43511 780 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 PSMD10O75832 226 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 SMC2O95347 1197 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 LMNAP02545 664 aaKnown RBP7.04□□□□□ -1.28
HDAC1-205ENST00000472928 WEE2P0C1S8 567 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 SRGAP2BP0DMP2 458 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 MARK3P27448 753 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 CASP1P29466 404 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 TCF7P36402 384 aaPredicted RBP7.04□□□□□ -1.28
HDAC1-205ENST00000472928 EPHA4P54764 986 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 PLCB3Q01970 1234 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 CYP4A11Q02928 519 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 TMEM62Q0P6H9 643 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 ITGB3BPQ13352 177 aaPredicted RBP7.04□□□□□ -1.28
HDAC1-205ENST00000472928 PPP2R5CQ13362 524 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 PDIA5Q14554 519 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 GNPTABQ3T906 1256 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 ANO6Q4KMQ2 910 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 FAM102BQ5T8I3 360 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 C11orf57Q6ZUT1 292 aaPredicted RBP7.04□□□□□ -1.28
HDAC1-205ENST00000472928 CYP2U1Q7Z449 544 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 NLRX1Q86UT6 975 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 THNSL1Q8IYQ7 743 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 KIAA2013Q8IYS2 634 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 ZDHHC14Q8IZN3 488 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 DTWD2Q8NBA8 298 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 RNF214Q8ND24 703 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 FLCNQ8NFG4 579 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 STAMQ92783 540 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 SMARCE1Q969G3 411 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 GPRASP2Q96D09 838 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 PAGE5Q96GU1 130 aa7.04□□□□□ -1.28
HDAC1-205ENST00000472928 NECTIN4Q96NY8 510 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms