RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 CUTAO60888 179 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 ALDH2P05091 517 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 MCF2P10911 925 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 GRM5P41594 1212 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 OR1G1P47890 313 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 NDUFV1P49821 464 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 DNM1Q05193 864 aaKnown RBP16.51■□□□□ 0.23
CALD1-215ENST00000472096 AXDND1Q5T1B0 1012 aaPredicted RBP16.51■□□□□ 0.23
CALD1-215ENST00000472096 ZPBP2Q6X784 338 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 SV2BQ7L1I2 683 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 DYMQ7RTS9 669 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 ZBTB33Q86T24 672 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.51■□□□□ 0.23
CALD1-215ENST00000472096 FIZ1Q96SL8 496 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 ZHX3Q9H4I2 956 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 ANKFY1Q9P2R3 1169 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 ZDHHC9Q9Y397 364 aa16.51■□□□□ 0.23
CALD1-215ENST00000472096 C2orf71A6NGG8 1288 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 MYMKA6NI61 221 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 F8W810 466 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 TOM1L1O75674 476 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 CTSAP10619 480 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 SCP2P22307 547 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 TUSC3Q13454 348 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 BECN1Q14457 450 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 NOLC1Q14978 699 aaKnown RBP eCLIP16.5■□□□□ 0.23
CALD1-215ENST00000472096 PTCRAQ6ISU1 281 aaPredicted RBP16.5■□□□□ 0.23
CALD1-215ENST00000472096 SHC4Q6S5L8 630 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 SFR1Q86XK3 245 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 FAM178BQ8IXR5 827 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 PDILTQ8N807 584 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 VN1R2Q8NFZ6 395 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 AUTS2Q8WXX7 1259 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 HERC2P3Q9BVR0 1158 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 PANK2Q9BZ23 570 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 STK39Q9UEW8 545 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 CFAP45Q9UL16 551 aa16.5■□□□□ 0.23
CALD1-215ENST00000472096 MTCL1Q9Y4B5 1905 aaKnown RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 NR1I2O75469 434 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 EFEMP2O95967 443 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 THP07101 528 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 HARSP12081 509 aaKnown RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 NMT1P30419 496 aaKnown RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 CA8P35219 290 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 RBM10P98175 930 aaKnown RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 KCNC3Q14003 757 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 BMS1Q14692 1282 aaKnown RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 PTPN14Q15678 1187 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 NAB2Q15742 525 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 PUS10Q3MIT2 529 aaKnown RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 RNF168Q8IYW5 571 aaPredicted RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 MRPL43Q8N983 215 aaKnown RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 DNAJC19Q96DA6 116 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 BICD1Q96G01 975 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 ZBTB45Q96K62 511 aaPredicted RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 MSLNLQ96KJ4 702 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 NECAB3Q96P71 396 aaPredicted RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 UHRF1Q96T88 793 aaPredicted RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 TCHPQ9BT92 498 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 CCDC94Q9BW85 323 aaPredicted RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 CLEC1BQ9P126 229 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 CACNG4Q9UBN1 327 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 BARX2Q9UMQ3 279 aaPredicted RBP16.49■□□□□ 0.23
CALD1-215ENST00000472096 TBX20Q9UMR3 447 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 IRAK3Q9Y616 596 aa16.49■□□□□ 0.23
CALD1-215ENST00000472096 CASTOR2A6NHX0 329 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 HNRNPDLO14979 420 aaKnown RBP16.48■□□□□ 0.23
CALD1-215ENST00000472096 PIGRP01833 764 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 SOD2P04179 222 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 IL9P15248 144 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 ME1P48163 572 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 YARSP54577 528 aaKnown RBP16.48■□□□□ 0.23
CALD1-215ENST00000472096 OSTNP61366 133 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 GTF2BQ00403 316 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 MCL1Q07820 350 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 CLUL1Q15846 466 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 GLRA4Q5JXX5 417 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 MAP4K3Q8IVH8 894 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 KHSRPQ92945 711 aaKnown RBP eCLIP16.48■□□□□ 0.23
CALD1-215ENST00000472096 SNX27Q96L92 541 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 PPP1R10Q96QC0 940 aaKnown RBP16.48■□□□□ 0.23
CALD1-215ENST00000472096 PAAF1Q9BRP4 392 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 COLEC11Q9BWP8 271 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 HAPLN2Q9GZV7 340 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 ST6GALNAC4Q9H4F1 302 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 TOPORSQ9NS56 1045 aaPredicted RBP16.48■□□□□ 0.23
CALD1-215ENST00000472096 CD207Q9UJ71 328 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 PCDHA7Q9UN72 937 aa16.48■□□□□ 0.23
CALD1-215ENST00000472096 CXCL14O95715 111 aa16.47■□□□□ 0.23
CALD1-215ENST00000472096 SRGAP2BP0DMP2 458 aa16.47■□□□□ 0.23
CALD1-215ENST00000472096 GAP43P17677 238 aa16.47■□□□□ 0.23
CALD1-215ENST00000472096 ABCD1P33897 745 aa16.47■□□□□ 0.23
CALD1-215ENST00000472096 LIG4P49917 911 aa16.47■□□□□ 0.23
CALD1-215ENST00000472096 SMAD4Q13485 552 aaKnown RBP16.47■□□□□ 0.23
CALD1-215ENST00000472096 HSP90AA2PQ14568 343 aaPredicted RBP16.47■□□□□ 0.23
CALD1-215ENST00000472096 ARSIQ5FYB1 569 aa16.47■□□□□ 0.23
CALD1-215ENST00000472096 XKR4Q5GH76 650 aa16.47■□□□□ 0.23
CALD1-215ENST00000472096 FUT10Q6P4F1 479 aa16.47■□□□□ 0.23
CALD1-215ENST00000472096 TMEM184AQ6ZMB5 413 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms