RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 LMBR1Q8WVP7 490 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 TAF4BQ92750 862 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 EXOC4Q96A65 974 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 SAAL1Q96ER3 474 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 CALR3Q96L12 384 aaKnown RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 PCDHB18PQ96TA0 734 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 PCYT2Q99447 389 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 ZMYND15Q9H091 742 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 THAP2Q9H0W7 228 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 POLR3FQ9H1D9 316 aaPredicted RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 ACBD3Q9H3P7 528 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 DHX33Q9H6R0 707 aaKnown RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 ATP6V0A4Q9HBG4 840 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 BTBD7Q9P203 1132 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 TTC7AQ9ULT0 858 aaPredicted RBP6.93□□□□□ -1.3
SPEN-204ENST00000471538 COG5Q9UP83 839 aa6.93□□□□□ -1.3
SPEN-204ENST00000471538 TRIOBPQ9H2D6 2365 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 A0A0G2JLL6 359 aaPredicted RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 UNCXA6NJT0 531 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 H0YCG3 227 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 RAD51CO43502 376 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 HEXIM1O94992 359 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 SGPL1O95470 568 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 OATP04181 439 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 ECHS1P30084 290 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 ABCD1P33897 745 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 ARL2P36404 184 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 TNNT3P45378 269 aaPredicted RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 DNA2P51530 1060 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 GYS2P54840 703 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 FKBP1BP68106 108 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 FMO1Q01740 532 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 PRPF4BQ13523 1007 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 EMC2Q15006 297 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 TARBP2Q15633 366 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 STXBP2Q15833 593 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 HABP4Q5JVS0 413 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 DCAF12L1Q5VU92 463 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 C11orf63Q6NUN7 778 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 PEX26Q7Z412 305 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 PRRT2Q7Z6L0 340 aaPredicted RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 DAAM2Q86T65 1068 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 NOP9Q86U38 636 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 IFT20Q8IY31 132 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 RPUSD2Q8IZ73 545 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 GPD1LQ8N335 351 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 MREGQ8N565 214 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 EIF1ADQ8N9N8 165 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 TSEN2Q8NCE0 465 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 ASAP3Q8TDY4 903 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 CASKIN2Q8WXE0 1202 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 CTNNBL1Q8WYA6 563 aaPredicted RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 DDX1Q92499 740 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 FGD4Q96M96 766 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 KRT12Q99456 494 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 SH3GL2Q99962 352 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.92□□□□□ -1.3
SPEN-204ENST00000471538 NIFKQ9BYG3 293 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 HAPLN2Q9GZV7 340 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 PORCNQ9H237 461 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 TOPORSQ9NS56 1045 aaPredicted RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 FBXO40Q9UH90 709 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 ADAM21Q9UKJ8 722 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 FAN1Q9Y2M0 1017 aa6.92□□□□□ -1.3
SPEN-204ENST00000471538 NOC2LQ9Y3T9 749 aaKnown RBP6.92□□□□□ -1.3
SPEN-204ENST00000471538 MYH9P35579 1960 aaKnown RBP6.91□□□□□ -1.3
SPEN-204ENST00000471538 GSTTP1A0A1W2PQM5 241 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 ZSCAN5CA6NGD5 496 aaPredicted RBP6.91□□□□□ -1.3
SPEN-204ENST00000471538 TMCO5BA8MYB1 307 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 CCDC188H7C350 402 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 PGRMC1O00264 195 aaKnown RBP6.91□□□□□ -1.3
SPEN-204ENST00000471538 EXTL3O43909 919 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 CEP104O60308 925 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 PEX10O60683 326 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 ZC3H11AO75152 810 aaKnown RBP eCLIP6.91□□□□□ -1.3
SPEN-204ENST00000471538 RTN2O75298 545 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 FARP2O94887 1054 aaPredicted RBP6.91□□□□□ -1.3
SPEN-204ENST00000471538 EDN1P05305 212 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 SLC10A3P09131 477 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 GZMAP12544 262 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 ABCB4P21439 1286 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 SCP2P22307 547 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 UBA1P22314 1058 aaKnown RBP6.91□□□□□ -1.3
SPEN-204ENST00000471538 GLRA2P23416 452 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 NAMPTP43490 491 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 CARSP49589 748 aaKnown RBP6.91□□□□□ -1.3
SPEN-204ENST00000471538 MFAP3P55082 362 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 WNT7BP56706 349 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 ERVK-9P63128 1117 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 TNNC1P63316 161 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 POU5F1Q01860 360 aaKnown RBP6.91□□□□□ -1.3
SPEN-204ENST00000471538 MOGSQ13724 837 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 PRKG1Q13976 671 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 PSMD6Q15008 389 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 MTERF2Q49AM1 385 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 CRELD2Q6UXH1 353 aaPredicted RBP6.91□□□□□ -1.3
SPEN-204ENST00000471538 SND1Q7KZF4 910 aaKnown RBP eCLIP6.91□□□□□ -1.3
SPEN-204ENST00000471538 SV2AQ7L0J3 742 aa6.91□□□□□ -1.3
SPEN-204ENST00000471538 ZNF771Q7L3S4 317 aaPredicted RBP6.91□□□□□ -1.3
SPEN-204ENST00000471538 CYFIP1Q7L576 1253 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms