RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 DEF6Q9H4E7 631 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 PDE11AQ9HCR9 933 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 RAB20Q9NX57 234 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 HDAC6Q9UBN7 1215 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 GTF2IRD1Q9UHL9 959 aa10.15□□□□□ -0.78
VPS52-216ENST00000471309 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 A0A1B0GUA9 196 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 ZNF263O14978 683 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 TREHO43280 583 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 GFPT2O94808 682 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 IL18RAPO95256 599 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 RPLP2P05387 115 aaKnown RBP10.14□□□□□ -0.79
VPS52-216ENST00000471309 DARSP14868 501 aaKnown RBP10.14□□□□□ -0.79
VPS52-216ENST00000471309 ARF4P18085 180 aaPredicted RBP10.14□□□□□ -0.79
VPS52-216ENST00000471309 TNNI1P19237 187 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 TNFSF9P41273 254 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 ARHGAP25P42331 645 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 VAV2P52735 878 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 ETF1P62495 437 aaKnown RBP10.14□□□□□ -0.79
VPS52-216ENST00000471309 HTRA3P83110 453 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 GCNT1Q02742 428 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 KLHL30Q0D2K2 578 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 DRAP1Q14919 205 aaPredicted RBP10.14□□□□□ -0.79
VPS52-216ENST00000471309 SLC18A3Q16572 532 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 DCAF4L1Q3SXM0 396 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 ARHGAP29Q52LW3 1261 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 SEZ6Q53EL9 994 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 TDRD10Q5VZ19 366 aaKnown RBP10.14□□□□□ -0.79
VPS52-216ENST00000471309 SMYD5Q6GMV2 418 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 CCSAPQ6IQ19 270 aaPredicted RBP10.14□□□□□ -0.79
VPS52-216ENST00000471309 CXCL17Q6UXB2 119 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 ENOSF1Q7L5Y1 443 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 APBB1IPQ7Z5R6 666 aaPredicted RBP10.14□□□□□ -0.79
VPS52-216ENST00000471309 TXLNBQ8N3L3 684 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 NME8Q8N427 588 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 PCSK9Q8NBP7 692 aaKnown RBP10.14□□□□□ -0.79
VPS52-216ENST00000471309 SLAIN1Q8ND83 568 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 DNAJB3Q8WWF6 145 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 ZNF516Q92618 1163 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 SEMA4DQ92854 862 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 NT5C1BQ96P26 610 aa10.14□□□□□ -0.79
VPS52-216ENST00000471309 DDX20Q9UHI6 824 aaKnown RBP10.14□□□□□ -0.79
VPS52-216ENST00000471309 KIF5CO60282 957 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 EVI5O60447 810 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 B4GALT4O60513 344 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 HLA-DRAP01903 254 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 ASGR1P07306 291 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 CLTAP09496 248 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 EIF4BP23588 611 aaKnown RBP10.13□□□□□ -0.79
VPS52-216ENST00000471309 AXLP30530 894 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 PIK3CAP42336 1068 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 MFAP3P55082 362 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 ARID5AQ03989 594 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 PTK2Q05397 1052 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 NCBP1Q09161 790 aaKnown RBP10.13□□□□□ -0.79
VPS52-216ENST00000471309 TMEM62Q0P6H9 643 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 BIRC3Q13489 604 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 ENOX2Q16206 610 aaKnown RBP10.13□□□□□ -0.79
VPS52-216ENST00000471309 NBPF20Q3BBV1 942 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 KIAA1328Q86T90 577 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 THNSL1Q8IYQ7 743 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 CEP120Q8N960 986 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 HELQQ8TDG4 1101 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 PPP1R13LQ8WUF5 828 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 ZNF296Q8WUU4 475 aaPredicted RBP10.13□□□□□ -0.79
VPS52-216ENST00000471309 JAKMIP2Q96AA8 810 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 OSMRQ99650 979 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 ADPGKQ9BRR6 497 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 IFIH1Q9BYX4 1025 aaKnown RBP10.13□□□□□ -0.79
VPS52-216ENST00000471309 TSGA10Q9BZW7 698 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 HAUS4Q9H6D7 363 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 UBE2TQ9NPD8 197 aaPredicted RBP10.13□□□□□ -0.79
VPS52-216ENST00000471309 LUC7LQ9NQ29 371 aaKnown RBP10.13□□□□□ -0.79
VPS52-216ENST00000471309 LZTFL1Q9NQ48 299 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 C1orf112Q9NSG2 853 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 MYO1AQ9UBC5 1043 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 PAXBP1Q9Y5B6 917 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 PCNTO95613 3336 aa10.13□□□□□ -0.79
VPS52-216ENST00000471309 A0A0U1RQJ8 604 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 KRT86O43790 486 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 LRRN2O75325 713 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 CSDE1O75534 798 aaKnown RBP10.12□□□□□ -0.79
VPS52-216ENST00000471309 CABYRO75952 493 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 VNN1O95497 513 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 INHAP05111 366 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 STAG3L1P0CL83 205 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 GRM5P41594 1212 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 CRYBB1P53674 252 aaPredicted RBP10.12□□□□□ -0.79
VPS52-216ENST00000471309 ZNF200P98182 395 aaPredicted RBP10.12□□□□□ -0.79
VPS52-216ENST00000471309 CYP27A1Q02318 531 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 PTPN11Q06124 597 aaPredicted RBP10.12□□□□□ -0.79
VPS52-216ENST00000471309 GFPT1Q06210 699 aaPredicted RBP10.12□□□□□ -0.79
VPS52-216ENST00000471309 BMS1Q14692 1282 aaKnown RBP10.12□□□□□ -0.79
VPS52-216ENST00000471309 SNX17Q15036 470 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 KCNA10Q16322 511 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 ARHGAP44Q17R89 818 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 WDR44Q5JSH3 913 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 C10orf76Q5T2E6 689 aa10.12□□□□□ -0.79
VPS52-216ENST00000471309 LMBRD2Q68DH5 695 aaPredicted RBP10.12□□□□□ -0.79
VPS52-216ENST00000471309 NOTUMQ6P988 496 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms