RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, human

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLIP4-209	ENST00000471165	FBXO41	Q8TF61	875 aa		4.11	□□□□□ -1.75
CLIP4-209	ENST00000471165	VPS16	Q9H269	839 aa		4.11	□□□□□ -1.75
CLIP4-209	ENST00000471165	TRBV23-1	A0A0A0MS06	115 aa		4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	MMP13	P45452	471 aa		4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	PLCD1	P51178	756 aa		4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	FOXB2	Q5VYV0	432 aa		4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	KAZN	Q674X7	775 aa		4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	SLC2A7	Q6PXP3	512 aa		4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	SSH3	Q8TE77	659 aa		4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	NSMCE1	Q8WV22	266 aa		4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	FERMT2	Q96AC1	680 aa		4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	CDC5L	Q99459	802 aa	Known RBP	4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	NCOA5	Q9HCD5	579 aa	Known RBP	4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	ARAP1	Q96P48	1450 aa		4.1	□□□□□ -1.75
CLIP4-209	ENST00000471165	APOL3	O95236	402 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	VAV2	P52735	878 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	RABEP1	Q15276	862 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	TMEM177	Q53S58	311 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	FAM209A	Q5JX71	171 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	ANKS3	Q6ZW76	656 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	NME9	Q86XW9	330 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	TMEM255B	Q8WV15	326 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	ZNF428	Q96B54	188 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	CDC6	Q99741	560 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	TMEM79	Q9BSE2	394 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	ACBD3	Q9H3P7	528 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	TUBA8	Q9NY65	449 aa	Predicted RBP	4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	PODXL2	Q9NZ53	605 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	KCNE5	Q9UJ90	142 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	MRC2	Q9UBG0	1479 aa		4.09	□□□□□ -1.75
CLIP4-209	ENST00000471165	TCF20	Q9UGU0	1960 aa	Known RBP	4.09	□□□□□ -1.76
CLIP4-209	ENST00000471165	CCDC78	A2IDD5	438 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	YY2	O15391	372 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	DIAPH1	O60610	1272 aa	Known RBP	4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	PRPF6	O94906	941 aa	Known RBP	4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	FGFR4	P22455	802 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	SFPQ	P23246	707 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	THBS3	P49746	956 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	EPHA7	Q15375	998 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	DDR2	Q16832	855 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	KIAA1841	Q6NSI8	718 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	GSG1L	Q6UXU4	331 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	CEP95	Q96GE4	821 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	CTAGE1	Q96RT6	745 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	SH2D3A	Q9BRG2	576 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	MYL10	Q9BUA6	226 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	RNPEP	Q9H4A4	650 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	TMEM260	Q9NX78	707 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	ATAD2B	Q9ULI0	1458 aa		4.08	□□□□□ -1.76
CLIP4-209	ENST00000471165	RECK	O95980	971 aa		4.07	□□□□□ -1.76
CLIP4-209	ENST00000471165	TNFRSF1B	P20333	461 aa		4.07	□□□□□ -1.76
CLIP4-209	ENST00000471165	UBE3C	Q15386	1083 aa		4.07	□□□□□ -1.76
CLIP4-209	ENST00000471165	SF3B3	Q15393	1217 aa	Known RBP	4.07	□□□□□ -1.76
CLIP4-209	ENST00000471165	SUMO4	Q6EEV6	95 aa		4.07	□□□□□ -1.76
CLIP4-209	ENST00000471165	TIGD7	Q6NT04	549 aa	Predicted RBP	4.07	□□□□□ -1.76
CLIP4-209	ENST00000471165	FBXL22	Q6P050	247 aa		4.07	□□□□□ -1.76
CLIP4-209	ENST00000471165	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
CLIP4-209	ENST00000471165	KIF21A	Q7Z4S6	1674 aa		4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	PPP6C	O00743	305 aa		4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	MPPED1	O15442	326 aa		4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	CYP17A1	P05093	508 aa		4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	HSD11B2	P80365	405 aa		4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	ERV3-1	Q14264	604 aa		4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	MED25	Q71SY5	747 aa		4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	TFAP2B	Q92481	460 aa		4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	SPATA9	Q9BWV2	254 aa		4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	PADI4	Q9UM07	663 aa		4.06	□□□□□ -1.76
CLIP4-209	ENST00000471165	AATK	Q6ZMQ8	1374 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	DISP3	Q9P2K9	1392 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165		A0A1W2PR48	441 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	ADCY3	O60266	1144 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	SEC24D	O94855	1032 aa	Predicted RBP	4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	PCDH8	O95206	1070 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	GPANK1	O95872	356 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	PTX3	P26022	381 aa	Predicted RBP	4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	NANOS2	P60321	138 aa	Known RBP	4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	MFSD14B	Q5SR56	506 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	PXDC1	Q5TGL8	231 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	PHYKPL	Q8IUZ5	450 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	COLGALT2	Q8IYK4	626 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	IGSF22	Q8N9C0	903 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	SLC35B2	Q8TB61	432 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	MDM1	Q8TC05	714 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	REXO4	Q9GZR2	422 aa	Known RBP	4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	PCIF1	Q9H4Z3	704 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	LAMC3	Q9Y6N6	1575 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	WDR62	O43379	1518 aa		4.05	□□□□□ -1.76
CLIP4-209	ENST00000471165	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.04	□□□□□ -1.76
CLIP4-209	ENST00000471165	KCNA6	P17658	529 aa		4.04	□□□□□ -1.76
CLIP4-209	ENST00000471165	HDLBP	Q00341	1268 aa	Known RBP	4.04	□□□□□ -1.76
CLIP4-209	ENST00000471165	LRRC41	Q15345	812 aa		4.04	□□□□□ -1.76
CLIP4-209	ENST00000471165	KRT71	Q3SY84	523 aa		4.04	□□□□□ -1.76
CLIP4-209	ENST00000471165	CEP78	Q5JTW2	689 aa		4.04	□□□□□ -1.76
CLIP4-209	ENST00000471165	ABHD17C	Q6PCB6	329 aa		4.04	□□□□□ -1.76
CLIP4-209	ENST00000471165	RASAL3	Q86YV0	1011 aa		4.04	□□□□□ -1.76
CLIP4-209	ENST00000471165	C7orf31	Q8N865	590 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms