RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TMEM39AQ9NV64 488 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 INTS13Q9NVM9 706 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
CCM2-204ENST00000470837 PADI3Q9ULW8 664 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 LUC7L2Q9Y383 392 aaKnown RBP10.57□□□□□ -0.72
CCM2-204ENST00000470837 DAAM1Q9Y4D1 1078 aa10.57□□□□□ -0.72
CCM2-204ENST00000470837 ABLIM1O14639 778 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 CLTBP09497 229 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 CXCL8P10145 99 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 COL6A1P12109 1028 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 ITGA4P13612 1032 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 TNFSF9P41273 254 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 PIK3CAP42336 1068 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 DLG4P78352 724 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 TMEM132DQ14C87 1099 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 ENOX2Q16206 610 aaKnown RBP10.56□□□□□ -0.72
CCM2-204ENST00000470837 ZBTB41Q5SVQ8 909 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 CRELD2Q6UXH1 353 aaPredicted RBP10.56□□□□□ -0.72
CCM2-204ENST00000470837 NT5DC4Q86YG4 428 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 CEP120Q8N960 986 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 FBXL13Q8NEE6 735 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 SEPT8Q92599 483 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 APBB2Q92870 758 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 FAM81BQ96LP2 452 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 SPAG5Q96R06 1193 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 RPS6KC1Q96S38 1066 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 TSPAN18Q96SJ8 248 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 POP1Q99575 1024 aaKnown RBP10.56□□□□□ -0.72
CCM2-204ENST00000470837 EIF2AQ9BY44 585 aaKnown RBP10.56□□□□□ -0.72
CCM2-204ENST00000470837 EDEM3Q9BZQ6 932 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 NUCKS1Q9H1E3 243 aaKnown RBP10.56□□□□□ -0.72
CCM2-204ENST00000470837 ERVK-5Q9HDB9 667 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 SNTG2Q9NY99 539 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 PRKAG2Q9UGJ0 569 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 PCDHB2Q9Y5E7 798 aa10.56□□□□□ -0.72
CCM2-204ENST00000470837 PMM2O15305 246 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 FAM189A1O60320 539 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 IBSPP21815 317 aaPredicted RBP10.55□□□□□ -0.72
CCM2-204ENST00000470837 RFX1P22670 979 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 CASP14P31944 242 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 PBX1P40424 430 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 PPP3CAQ08209 521 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 PTPN21Q16825 1174 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 CBWD6Q4V339 395 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 FIGNQ5HY92 759 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 CBWD3Q5JTY5 395 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 CBWD5Q5RIA9 395 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 SV2AQ7L0J3 742 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 RNF169Q8NCN4 708 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 EHBP1Q8NDI1 1231 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 CCDC112Q8NEF3 446 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 BEST2Q8NFU1 509 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 KIF12Q96FN5 646 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 ADAM2Q99965 735 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 PPP1R12CQ9BZL4 782 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 TMEM117Q9H0C3 514 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 INTS2Q9H0H0 1204 aaKnown RBP10.55□□□□□ -0.72
CCM2-204ENST00000470837 AGO3Q9H9G7 860 aaKnown RBP10.55□□□□□ -0.72
CCM2-204ENST00000470837 UBN1Q9NPG3 1134 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 PLCB1Q9NQ66 1216 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 PRDM5Q9NQX1 630 aaPredicted RBP10.55□□□□□ -0.72
CCM2-204ENST00000470837 C1orf112Q9NSG2 853 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 FAM105AQ9NUU6 356 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 RAB20Q9NX57 234 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 SIK3Q9Y2K2 1263 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 DERAQ9Y315 318 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 C2CD2Q9Y426 696 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 IPPQ9Y573 584 aa10.55□□□□□ -0.72
CCM2-204ENST00000470837 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
CCM2-204ENST00000470837 A0A1W2PQJ5 194 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 LACTBL1A8MY62 500 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 ZC3H11AO75152 810 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCM2-204ENST00000470837 RECQL4O94761 1208 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 KRT19P08727 400 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 CCDC172P0C7W6 258 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 AKAP5P24588 427 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 PON1P27169 355 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 KRT9P35527 623 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 MNX1P50219 401 aaPredicted RBP10.54□□□□□ -0.72
CCM2-204ENST00000470837 POLR2FP61218 127 aaKnown RBP10.54□□□□□ -0.72
CCM2-204ENST00000470837 CLDN10P78369 228 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 ZBED6P86452 979 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 FAAP100Q0VG06 881 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 RAPGEF1Q13905 1077 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 HS1BP3Q53T59 392 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 LMBRD2Q68DH5 695 aaPredicted RBP10.54□□□□□ -0.72
CCM2-204ENST00000470837 JADE1Q6IE81 842 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 TRIM65Q6PJ69 517 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 OR8K1Q8NGG5 319 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 PLEKHO2Q8TD55 490 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 SNX27Q96L92 541 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 NT5C1BQ96P26 610 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 MTMR12Q9C0I1 747 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 NXF3Q9H4D5 531 aaKnown RBP10.54□□□□□ -0.72
CCM2-204ENST00000470837 SLC38A7Q9NVC3 462 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 CEP72Q9P209 647 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 APEX2Q9UBZ4 518 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 CAPN11Q9UMQ6 739 aa10.54□□□□□ -0.72
CCM2-204ENST00000470837 HTTP42858 3142 aa10.53□□□□□ -0.72
CCM2-204ENST00000470837 A0A0U1RQF3 1178 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms