RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 INTS13Q9NVM9 706 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 MIOSQ9NXC5 875 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 TAB2Q9NYJ8 693 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 RBAKQ9NYW8 714 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-209ENST00000470247 PRKAG2Q9UGJ0 569 aa12.23□□□□□ -0.45
SREBF1-209ENST00000470247 ABHD14A-ACY1A0A1B0GW23 586 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 LRRIQ3A6PVS8 624 aaPredicted RBP12.22□□□□□ -0.45
SREBF1-209ENST00000470247 INPPL1O15357 1258 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 EOMESO95936 686 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 PFKMP08237 780 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 TRIM49P0CI25 452 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 TRIM49CP0CI26 452 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 CDK11BP21127 795 aaKnown RBP12.22□□□□□ -0.45
SREBF1-209ENST00000470247 AFF1P51825 1210 aaKnown RBP12.22□□□□□ -0.45
SREBF1-209ENST00000470247 COPB1P53618 953 aaKnown RBP12.22□□□□□ -0.45
SREBF1-209ENST00000470247 SPAG1Q07617 926 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 PPIGQ13427 754 aaKnown RBP eCLIP12.22□□□□□ -0.455e-8■■□□□ 12.1
SREBF1-209ENST00000470247 MAN2A1Q16706 1144 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 TMEM240Q5SV17 173 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 SARM1Q6SZW1 724 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 CREBRFQ8IUR6 639 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 EFCAB13Q8IY85 973 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 TMEM130Q8N3G9 435 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 CCDC127Q96BQ5 260 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 TUBGCP2Q9BSJ2 902 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 APOL6Q9BWW8 343 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 ASB7Q9H672 318 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 ELAC1Q9H777 363 aaKnown RBP12.22□□□□□ -0.45
SREBF1-209ENST00000470247 TOPORSQ9NS56 1045 aaPredicted RBP12.22□□□□□ -0.45
SREBF1-209ENST00000470247 KLK14Q9P0G3 267 aa12.22□□□□□ -0.45
SREBF1-209ENST00000470247 MAGEC2Q9UBF1 373 aaPredicted RBP12.22□□□□□ -0.45
SREBF1-209ENST00000470247 LTBP2Q14767 1821 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 A0A1B0GTH6 734 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 GOLGA6L3A6NEY3 463 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 PTGESO14684 152 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 OFD1O75665 1012 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 IL18RAPO95256 599 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 C4BPAP04003 597 aaKnown RBP12.21□□□□□ -0.45
SREBF1-209ENST00000470247 SKIP12755 728 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 ITGA4P13612 1032 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 KCNE1P15382 129 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 MTIF2P46199 727 aaKnown RBP12.21□□□□□ -0.45
SREBF1-209ENST00000470247 RGS19P49795 217 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 FPGSQ05932 587 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 KCNH2Q12809 1159 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 IKBKEQ14164 716 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 HSP90AA2PQ14568 343 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-209ENST00000470247 NR1I3Q14994 352 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 VWA3BQ502W6 1294 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 CLLU1OSQ5K130 101 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 LMBRD2Q68DH5 695 aaPredicted RBP12.21□□□□□ -0.45
SREBF1-209ENST00000470247 C15orf39Q6ZRI6 1047 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 ZNF365Q70YC5 407 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 OR5B17Q8NGF7 314 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 CXorf38Q8TB03 319 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 ZFP42Q96MM3 310 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 GAD1Q99259 594 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 VPS16Q9H269 839 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 GRPEL1Q9HAV7 217 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 RTN4Q9NQC3 1192 aaKnown RBP12.21□□□□□ -0.45
SREBF1-209ENST00000470247 TMEM161AQ9NX61 479 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 CNTN3Q9P232 1028 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 PARP2Q9UGN5 583 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 PLAGL2Q9UPG8 496 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 GIT1Q9Y2X7 761 aa12.21□□□□□ -0.45
SREBF1-209ENST00000470247 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.21□□□□□ -0.457e-7■■■□□ 17.9
SREBF1-209ENST00000470247 SMIM28A0A1B0GU29 152 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 PMM2O15305 246 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 TEX33O43247 280 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 NFICP08651 508 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 DLATP10515 647 aaKnown RBP12.2□□□□□ -0.46
SREBF1-209ENST00000470247 KRT13P13646 458 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
SREBF1-209ENST00000470247 WDR5P61964 334 aaKnown RBP12.2□□□□□ -0.46
SREBF1-209ENST00000470247 TPM4P67936 248 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 DEFB103AP81534 67 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 SURF1Q15526 300 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 NAB2Q15742 525 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 CBWD6Q4V339 395 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 CBWD3Q5JTY5 395 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 CBWD5Q5RIA9 395 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 JADE1Q6IE81 842 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 DPY19L2P1Q6NXN4 242 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 SV2AQ7L0J3 742 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 CD302Q8IX05 232 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 PGBD4Q96DM1 585 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 FAM212AQ96EL1 285 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 CGRRF1Q99675 332 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.2□□□□□ -0.465e-10■■■□□ 16.4
SREBF1-209ENST00000470247 TMEM117Q9H0C3 514 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 NDST4Q9H3R1 872 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 RSAD1Q9HA92 442 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 IFNKQ9P0W0 207 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 C2CD2Q9Y426 696 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 MICAL3Q7RTP6 2002 aa12.2□□□□□ -0.46
SREBF1-209ENST00000470247 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 ANK1P16157 1881 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 ARL5CA6NH57 179 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 LGALS16A8MUM7 142 aa12.19□□□□□ -0.46
SREBF1-209ENST00000470247 LRRN2O75325 713 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms