RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RASGRF2O14827 1237 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 ATP9AO75110 1047 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 DNAJC8O75937 253 aaPredicted RBP14.62□□□□□ -0.07
BRCA1-209ENST00000470026 FGFR4P22455 802 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 IVDP26440 423 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 SCTRP47872 440 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 KCNJ1P48048 391 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 CYP24A1Q07973 514 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 XRCC4Q13426 336 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 TAAR1Q96RJ0 339 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 SENP7Q9BQF6 1050 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 PLVAPQ9BX97 442 aa14.62□□□□□ -0.07
BRCA1-209ENST00000470026 COL4A5P29400 1685 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 TLDC2A0PJX2 215 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 XKR9Q5GH70 373 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 FAM102BQ5T8I3 360 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 C15orf39Q6ZRI6 1047 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 SV2AQ7L0J3 742 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 CCDC197Q8NCU1 140 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 SAAL1Q96ER3 474 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 FAM81BQ96LP2 452 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 CCDC114Q96M63 670 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 SELENOSQ9BQE4 189 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 SH2D3AQ9BRG2 576 aa14.61□□□□□ -0.07
BRCA1-209ENST00000470026 INTS9Q9NV88 658 aaKnown RBP14.61□□□□□ -0.07
BRCA1-209ENST00000470026 ARID2Q68CP9 1835 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 CCT8L1PA6NM43 557 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 CLDN3O15551 220 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 STBD1O95210 358 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 ITIH2P19823 946 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 MAN1A1P33908 653 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 PTP4A2Q12974 167 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 DMP1Q13316 513 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-209ENST00000470026 PTK6Q13882 451 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 CNGA2Q16280 664 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 PLA2G4FQ68DD2 849 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-209ENST00000470026 ANO5Q75V66 913 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 USP37Q86T82 979 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 FUKQ8N0W3 1084 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 MAIP1Q8WWC4 291 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 BSNDQ8WZ55 320 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 CCDC127Q96BQ5 260 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 POP1Q99575 1024 aaKnown RBP14.6□□□□□ -0.07
BRCA1-209ENST00000470026 PDCD2LQ9BRP1 358 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 ZNF341Q9BYN7 854 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 KIAA1683Q9H0B3 1180 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 YY1AP1Q9H869 796 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 TOPORSQ9NS56 1045 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-209ENST00000470026 FER1L6Q2WGJ9 1857 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 DENND3A2RUS2 1198 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 GSTA1P08263 222 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 GARTP22102 1010 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 SLC1A1P43005 524 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 RTP1P59025 263 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 RPS6P62753 249 aaKnown RBP14.6□□□□□ -0.07
BRCA1-209ENST00000470026 CLDN10P78369 228 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 CALCOCO2Q13137 446 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.6□□□□□ -0.07
BRCA1-209ENST00000470026 TAOK1Q7L7X3 1001 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 EXOC3L1Q86VI1 746 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 ZNF677Q86XU0 584 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 LRRC34Q8IZ02 419 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 MCOLN2Q8IZK6 566 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 OGFOD1Q8N543 542 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 DHX38Q92620 1227 aaKnown RBP14.6□□□□□ -0.07
BRCA1-209ENST00000470026 SERPINB12Q96P63 405 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 CDC42EP4Q9H3Q1 356 aaKnown RBP14.6□□□□□ -0.07
BRCA1-209ENST00000470026 PDLIM7Q9NR12 457 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 PTPN22Q9Y2R2 807 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 MYPNQ86TC9 1320 aa14.6□□□□□ -0.07
BRCA1-209ENST00000470026 TCEA3O75764 348 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 APBA3O96018 575 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 MYBL1P10243 752 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 EIF2AK2P19525 551 aaKnown RBP14.59□□□□□ -0.07
BRCA1-209ENST00000470026 HSPA1LP34931 641 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 MNAT1P51948 309 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 KRT17Q04695 432 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 SGO2Q562F6 1265 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 XRRA1Q6P2D8 792 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 NSMFQ6X4W1 530 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 KCNN1Q92952 543 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 DDX27Q96GQ7 796 aaKnown RBP14.59□□□□□ -0.07
BRCA1-209ENST00000470026 SGSM3Q96HU1 749 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 KIFC3Q9BVG8 833 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 VEZTQ9HBM0 779 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 RAVER2Q9HCJ3 691 aaKnown RBP14.59□□□□□ -0.07
BRCA1-209ENST00000470026 KMT5AQ9NQR1 393 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.59□□□□□ -0.077e-6■■■■■ 74.5
BRCA1-209ENST00000470026 PXMP2Q9NR77 195 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 NEU2Q9Y3R4 380 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 MROH7Q68CQ1 1323 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 CHUKO15111 745 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 C21orf2O43822 256 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 RAD17O75943 681 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 CYP1A1P04798 512 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-209ENST00000470026 DLATP10515 647 aaKnown RBP14.59□□□□□ -0.07
BRCA1-209ENST00000470026 MAPK4P31152 587 aa14.59□□□□□ -0.07
BRCA1-209ENST00000470026 PPP1R7Q15435 360 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms