RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 TLR9Q9NR96 1032 aa9.06□□□□□ -0.96
TRAPPC3-206ENST00000469757 MIOSQ9NXC5 875 aa9.06□□□□□ -0.96
TRAPPC3-206ENST00000469757 CPSF3Q9UKF6 684 aaKnown RBP9.06□□□□□ -0.96
TRAPPC3-206ENST00000469757 IRAK3Q9Y616 596 aa9.06□□□□□ -0.96
TRAPPC3-206ENST00000469757 SMIM28A0A1B0GU29 152 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 TISP43B9A030 160 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 ANKRD63C9JTQ0 380 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 KIAA0391O15091 583 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 POMCP01189 267 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 THP07101 528 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 PRR29P0C7W0 189 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 CXCL8P10145 99 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 CASP1P29466 404 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 AFMP43652 599 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 YARSP54577 528 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 PSMD2Q13200 908 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 KCNB1Q14721 858 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 POSTNQ15063 836 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 ENOX2Q16206 610 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 SLC10A6Q3KNW5 377 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 ZBTB41Q5SVQ8 909 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 SPOUT1Q5T280 376 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 KANK3Q6NY19 840 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 ZBTB33Q86T24 672 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 DDX53Q86TM3 631 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 C12orf56Q8IXR9 622 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 GPR65Q8IYL9 337 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 KIAA0895Q8NCT3 520 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 POF1BQ8WVV4 589 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 HPS3Q969F9 1004 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 TMEM169Q96HH4 297 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 CCDC34Q96HJ3 373 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 FBXL18Q96ME1 805 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 ZMAT2Q96NC0 199 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 ACAP3Q96P50 834 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 MSTO1Q9BUK6 570 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 HERC2P3Q9BVR0 1158 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 ZBP1Q9H171 429 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 IKZF4Q9H2S9 585 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 ALG13Q9NP73 1137 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 EXOC1Q9NV70 894 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 SLC38A7Q9NVC3 462 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 KLK14Q9P0G3 267 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 TBC1D7Q9P0N9 293 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 CGNQ9P2M7 1197 aaKnown RBP9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 PARP2Q9UGN5 583 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 GDAQ9Y2T3 454 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 DERAQ9Y315 318 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 XIRP2A4UGR9 3374 aa9.05□□□□□ -0.96
TRAPPC3-206ENST00000469757 BRWD1Q9NSI6 2320 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 GOLGA6L4A6NEF3 574 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 NRP1O14786 923 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 TGFB1I1O43294 461 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 KIF4AO95239 1232 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 RPN1P04843 607 aaKnown RBP9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 IGFBP4P22692 258 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 IRS1P35568 1242 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 TNFSF9P41273 254 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 UBE2HP62256 183 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 KRT17Q04695 432 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 PPP2R3AQ06190 1150 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 SOX4Q06945 474 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 HSP90AA2PQ14568 343 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 ZBTB6Q15916 424 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 CTC1Q2NKJ3 1217 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 COBLL1Q53SF7 1204 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 CRELD2Q6UXH1 353 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 BRSK2Q8IWQ3 736 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 CD302Q8IX05 232 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 CDCA3Q99618 268 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 TCHPQ9BT92 498 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 GBP3Q9H0R5 595 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 NGRNQ9NPE2 291 aaKnown RBP9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 AGPAT3Q9NRZ7 376 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 AGO2Q9UKV8 859 aaKnown RBP9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 C2CD2Q9Y426 696 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 UNC80Q8N2C7 3258 aa9.04□□□□□ -0.96
TRAPPC3-206ENST00000469757 SF3B1O75533 1304 aaKnown RBP eCLIP9.04□□□□□ -0.966e-6■■■■■ 103.4
TRAPPC3-206ENST00000469757 VWA8A3KMH1 1905 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 TRIP11Q15643 1979 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 F8W810 466 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 NCK2O43639 380 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 GADD45BO75293 160 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 NR1I2O75469 434 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 PRPF6O94906 941 aaKnown RBP9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 SOD2P04179 222 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 CTSAP10619 480 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 HARSP12081 509 aaKnown RBP9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 CYP3A5P20815 502 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 LRPAP1P30533 357 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 AARSP49588 968 aaKnown RBP eCLIP9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 ERVFC1P60507 584 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 OSTNP61366 133 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 HYAL1Q12794 435 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 STK4Q13043 487 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 KCNC3Q14003 757 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 SMC1AQ14683 1233 aaKnown RBP9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 PTPN14Q15678 1187 aa9.03□□□□□ -0.96
TRAPPC3-206ENST00000469757 NFIL3Q16649 462 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms