RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 ZMYND10O75800 440 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 SCP2P22307 547 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 MCM2P49736 904 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 YARSP54577 528 aaKnown RBP12.06□□□□□ -0.48
COL4A3-204ENST00000469504 NAB2Q15742 525 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 ECM1Q16610 540 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 UVSSAQ2YD98 709 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 C8orf34Q49A92 452 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 RTP2Q5QGT7 225 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 LIN9Q5TKA1 542 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 DCLRE1AQ6PJP8 1040 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 ZNF707Q96C28 371 aaPredicted RBP12.06□□□□□ -0.48
COL4A3-204ENST00000469504 CCDC94Q9BW85 323 aaPredicted RBP12.06□□□□□ -0.48
COL4A3-204ENST00000469504 MRPL4Q9BYD3 311 aaKnown RBP12.06□□□□□ -0.48
COL4A3-204ENST00000469504 UPF2Q9HAU5 1272 aaKnown RBP12.06□□□□□ -0.48
COL4A3-204ENST00000469504 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.06□□□□□ -0.48
COL4A3-204ENST00000469504 FBXW11Q9UKB1 542 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 PCDHB6Q9Y5E3 794 aa12.06□□□□□ -0.48
COL4A3-204ENST00000469504 TDRD15B5MCY1 1934 aaKnown RBP12.05□□□□□ -0.48
COL4A3-204ENST00000469504 CASTOR2A6NHX0 329 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 F8W810 466 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 XYLBO75191 536 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 KIF4AO95239 1232 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 GUCY2CP25092 1073 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 GBP2P32456 591 aaPredicted RBP12.05□□□□□ -0.48
COL4A3-204ENST00000469504 GRM5P41594 1212 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 NPTX2P47972 431 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 TOB1P50616 345 aaPredicted RBP12.05□□□□□ -0.48
COL4A3-204ENST00000469504 PSMD5Q16401 504 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 XKR4Q5GH76 650 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 HYIQ5T013 277 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 FAM171A1Q5VUB5 890 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 ARL6IP4Q66PJ3 421 aaKnown RBP12.05□□□□□ -0.48
COL4A3-204ENST00000469504 PALB2Q86YC2 1186 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 LNX1Q8TBB1 728 aaPredicted RBP12.05□□□□□ -0.48
COL4A3-204ENST00000469504 DDX27Q96GQ7 796 aaKnown RBP12.05□□□□□ -0.48
COL4A3-204ENST00000469504 PPP1R10Q96QC0 940 aaKnown RBP12.05□□□□□ -0.48
COL4A3-204ENST00000469504 RTP3Q9BQQ7 232 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 NTPCRQ9BSD7 190 aaKnown RBP12.05□□□□□ -0.48
COL4A3-204ENST00000469504 ARHGAP28Q9P2N2 729 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 WNT16Q9UBV4 365 aa12.05□□□□□ -0.48
COL4A3-204ENST00000469504 KMT2EQ8IZD2 1858 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 TTLL13PA6NNM8 815 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 CCDC169A6NNP5 214 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 PROB1E7EW31 1015 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 H0YCG3 227 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 RFPL2O75678 378 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 B3GAT3O94766 335 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 PDGFBP01127 241 aaPredicted RBP12.04□□□□□ -0.48
COL4A3-204ENST00000469504 MCF2P10911 925 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 LIG1P18858 919 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 AOC1P19801 751 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 FGFR3P22607 806 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 SMTNP53814 917 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 PEX3P56589 373 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 ATP2C1P98194 919 aaPredicted RBP12.04□□□□□ -0.48
COL4A3-204ENST00000469504 RAB33AQ14088 237 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 NBR1Q14596 966 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 UPP1Q16831 310 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 ZNF568Q3ZCX4 644 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 NT5DC1Q5TFE4 455 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 EEF1DP3Q658K8 133 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 RINT1Q6NUQ1 792 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 ANKS3Q6ZW76 656 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 C1orf186Q6ZWK4 172 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 CEP57Q86XR8 500 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 SPIRE2Q8WWL2 714 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 ATOH1Q92858 354 aaPredicted RBP12.04□□□□□ -0.48
COL4A3-204ENST00000469504 KCNN1Q92952 543 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 B3GALT6Q96L58 329 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 AK8Q96MA6 479 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 ACO2Q99798 780 aaKnown RBP12.04□□□□□ -0.48
COL4A3-204ENST00000469504 CLSTN3Q9BQT9 956 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 PAAF1Q9BRP4 392 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 KIFC3Q9BVG8 833 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 PTPRHQ9HD43 1115 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 KMT5AQ9NQR1 393 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 FBXL21Q9UKT6 434 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 GDAQ9Y2T3 454 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 BACE2Q9Y5Z0 518 aa12.04□□□□□ -0.48
COL4A3-204ENST00000469504 E9PMD0 336 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 H3BQV1 296 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 HIP1RO75146 1068 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 BMP15O95972 392 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 EDN1P05305 212 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 C8AP07357 584 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 SRFP11831 508 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 LAMP2P13473 410 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 PROZP22891 400 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 RPL9P32969 192 aaKnown RBP12.03□□□□□ -0.48
COL4A3-204ENST00000469504 ABCD1P33897 745 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 STRN3Q13033 797 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 PPM1LQ5SGD2 360 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 PRSS55Q6UWB4 352 aaPredicted RBP12.03□□□□□ -0.48
COL4A3-204ENST00000469504 MPZL3Q6UWV2 235 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 ALKAL1Q6UXT8 129 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 DAW1Q8N136 415 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 TMEM105Q8N8V8 129 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 HASPINQ8TF76 798 aa12.03□□□□□ -0.48
COL4A3-204ENST00000469504 ACAP3Q96P50 834 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms