RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 DBPQ10586 325 aaPredicted RBP6.07□□□□□ -1.44
VPS8-219ENST00000469479 SF3B3Q15393 1217 aaKnown RBP6.07□□□□□ -1.44
VPS8-219ENST00000469479 KIZQ2M2Z5 673 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 LRIT3Q3SXY7 679 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 USP30Q70CQ3 517 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 CXXC5Q7LFL8 322 aaKnown RBP6.07□□□□□ -1.44
VPS8-219ENST00000469479 UBE2Q1Q7Z7E8 422 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 TTPALQ9BTX7 342 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 PHF20Q9BVI0 1012 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 EPN3Q9H201 632 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 NUDCQ9Y266 331 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 TTC28Q96AY4 2481 aa6.07□□□□□ -1.44
VPS8-219ENST00000469479 NUP98P52948 1817 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 WNT10BO00744 389 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 NKRFO15226 690 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS8-219ENST00000469479 UFL1O94874 794 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 HMGCRP04035 888 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 PRKAR2BP31323 418 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 RPS8P62241 208 aaKnown RBP6.06□□□□□ -1.44
VPS8-219ENST00000469479 GPSM2P81274 684 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 ANKRD13AQ8IZ07 590 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 CFHR4Q92496 578 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 KCNJ15Q99712 375 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 SLC39A2Q9NP94 309 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 MTMR10Q9NXD2 777 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 ACTR10Q9NZ32 417 aa6.06□□□□□ -1.44
VPS8-219ENST00000469479 XDHP47989 1333 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 FAM205AQ6ZU69 1335 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 COL3A1P02461 1466 aaPredicted RBP6.05□□□□□ -1.44
VPS8-219ENST00000469479 KRT4P19013 534 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 FBLP22087 321 aaKnown RBP6.05□□□□□ -1.44
VPS8-219ENST00000469479 UBXN2AP68543 259 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 GRM7Q14831 915 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 TBR1Q16650 682 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 TNNI3KQ59H18 835 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 STRIP1Q5VSL9 837 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 FAM109BQ6ICB4 259 aaPredicted RBP6.05□□□□□ -1.44
VPS8-219ENST00000469479 LBX2Q6XYB7 198 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 USP53Q70EK8 1073 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 MCM10Q7L590 875 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 D2HGDHQ8N465 521 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 ZFYVE21Q9BQ24 234 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 LAMB1P07942 1786 aa6.05□□□□□ -1.44
VPS8-219ENST00000469479 ZNF646O15015 1829 aaPredicted RBP6.04□□□□□ -1.44
VPS8-219ENST00000469479 RPTORQ8N122 1335 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 POLR2AP24928 1970 aaKnown RBP6.04□□□□□ -1.44
VPS8-219ENST00000469479 PMS2P1A4D2B8 440 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 DDAH1O94760 285 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 BMP5P22003 454 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 EIF4A1P60842 406 aaKnown RBP6.04□□□□□ -1.44
VPS8-219ENST00000469479 LACTBP83111 547 aaPredicted RBP6.04□□□□□ -1.44
VPS8-219ENST00000469479 DACT2Q5SW24 774 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 LARP1BQ659C4 914 aaKnown RBP6.04□□□□□ -1.44
VPS8-219ENST00000469479 SH3TC2Q8TF17 1288 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 DCAF4Q8WV16 495 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 CELF1Q92879 486 aaKnown RBP6.04□□□□□ -1.44
VPS8-219ENST00000469479 PHACTR3Q96KR7 559 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 DEFB129Q9H1M3 183 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 SLC2A4RGQ9NR83 387 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 ARHGAP28Q9P2N2 729 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 MED23Q9ULK4 1368 aa6.04□□□□□ -1.44
VPS8-219ENST00000469479 ZNF804BA4D1E1 1349 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 SMAD7O15105 426 aaKnown RBP6.03□□□□□ -1.44
VPS8-219ENST00000469479 TLR2O60603 784 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 CCL5P13501 91 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 VAMP1P23763 118 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 PLA2G5P39877 138 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 GRIA2P42262 883 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 PPP2R2AP63151 447 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 TNFAIP1Q13829 316 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 PRKG1Q13976 671 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 EIF4HQ15056 248 aaKnown RBP6.03□□□□□ -1.44
VPS8-219ENST00000469479 DLGAP5Q15398 846 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 CCDC142Q17RM4 750 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 CCDC152Q4G0S7 254 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 LAIR1Q6GTX8 287 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 Q6ZPA2 131 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 TDHQ8IZJ6 230 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 RAET1EQ8TD07 263 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 GDF15Q99988 308 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 IER2Q9BTL4 223 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 COA1Q9GZY4 146 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 OR10A2Q9H208 303 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 BABAM1Q9NWV8 329 aa6.03□□□□□ -1.44
VPS8-219ENST00000469479 CCL15-CCL14A0A0B4J2E2 113 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 CAPN14A8MX76 684 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 FAM47E-STBD1D6RA91 191 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 DLX3O60479 287 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 CETPP11597 493 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 KCNQ1P51787 676 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 COL10A1Q03692 680 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 FXNQ16595 210 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 CCL15Q16663 113 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 LARP4Q71RC2 724 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS8-219ENST00000469479 EEPD1Q7L9B9 569 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 LRP10Q7Z4F1 713 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 NT5DC4Q86YG4 428 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 GPR135Q8IZ08 494 aa6.02□□□□□ -1.45
VPS8-219ENST00000469479 NLGN4XQ8N0W4 816 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms