RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 CCL15Q16663 113 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 PTPROQ16827 1216 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 LRRC8BQ6P9F7 803 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 MYCT1Q8N699 235 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 C2orf69Q8N8R5 385 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 IFT81Q8WYA0 676 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 NMD3Q96D46 503 aaKnown RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 SPATA16Q9BXB7 569 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 MIS12Q9H081 205 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 TPK1Q9H3S4 243 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 TAF1DQ9H5J8 278 aaPredicted RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 EMILIN3Q9NT22 766 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 DMGDHQ9UI17 866 aaKnown RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 AGAP1Q9UPQ3 857 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 TMX2Q9Y320 296 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 TNS1Q9HBL0 1735 aaKnown RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 GRIN3BO60391 1043 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 PTPREP23469 700 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 NLRP12P59046 1061 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 LSAMPQ13449 338 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 CYTH1Q15438 398 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 IQCEQ6IPM2 695 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 CYFIP1Q7L576 1253 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 METTL16Q86W50 562 aaKnown RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 R3HDMLQ9H3Y0 253 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 SAMD15Q9P1V8 674 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 CTTNBP2NLQ9P2B4 639 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 NKX1-2Q9UD57 310 aaPredicted RBP10.58□□□□□ -0.72
NUP50-214ENST00000469163 COMMD3-BMI1R4GMX3 469 aa10.58□□□□□ -0.72
NUP50-214ENST00000469163 CHD4Q14839 1912 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 CCDC160A6NGH7 325 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 ZNF233A6NK53 670 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 HMGB1P1B2RPK0 211 aaPredicted RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 FAM86B1E9PN63 330 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 CTNND1O60716 968 aaKnown RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 APOEP02649 317 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 FAM86B2P0C5J1 330 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 RPS12P25398 132 aaKnown RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 SULT2A1Q06520 285 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 BYSLQ13895 437 aaKnown RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 COG2Q14746 738 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 PPP1R18Q6NYC8 613 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 MIER3Q7Z3K6 550 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 CACNA2D4Q7Z3S7 1137 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 NLRX1Q86UT6 975 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 RAPGEF5Q92565 580 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 VMP1Q96GC9 406 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 IFT74Q96LB3 600 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 SPZ1Q9BXG8 430 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 MLXIPQ9HAP2 919 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 AKAP11Q9UKA4 1901 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 DDHD2O94830 711 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 GCNT3O95395 438 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 CYP2B6P20813 491 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 VPS41P49754 854 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 VAV2P52735 878 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 CSE1LP55060 971 aaKnown RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 KCTD2Q14681 263 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 PTPAQ15257 358 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 FAM102BQ5T8I3 360 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 PLA2G4FQ68DD2 849 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 CDR2LQ86X02 465 aaPredicted RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 DCAF4Q8WV16 495 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 PAGE5Q96GU1 130 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 IKZF4Q9H2S9 585 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 STIM2Q9P246 746 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 ZMAT5Q9UDW3 170 aaKnown RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 PCDHB13Q9Y5F0 798 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 SRPRBQ9Y5M8 271 aaKnown RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 SLC4A7Q9Y6M7 1214 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 CNTNAP1P78357 1384 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 WDR19Q8NEZ3 1342 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 C4AP0C0L4 1744 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 NPEPPSP55786 919 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 PSMC6P62333 389 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 ITGB3BPQ13352 177 aaPredicted RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 PDE1CQ14123 709 aaPredicted RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 TRPM8Q7Z2W7 1104 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 SPATA24Q86W54 205 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 CCDC110Q8TBZ0 833 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.57□□□□□ -0.72
NUP50-214ENST00000469163 MAML3Q96JK9 1138 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 MAP3K14Q99558 947 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 CENPKQ9BS16 269 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 PCIF1Q9H4Z3 704 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 SLC12A4Q9UP95 1085 aa10.57□□□□□ -0.72
NUP50-214ENST00000469163 RBMX2Q9Y388 322 aaKnown RBP10.57□□□□□ -0.72
NUP50-214ENST00000469163 PDS5AQ29RF7 1337 aaKnown RBP10.56□□□□□ -0.72
NUP50-214ENST00000469163 ZNF185O15231 689 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 ATP9AO75110 1047 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 UBOX5O94941 541 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 ATP1A1P05023 1023 aaKnown RBP10.56□□□□□ -0.72
NUP50-214ENST00000469163 SKIP12755 728 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 OSTNP61366 133 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 TUBA1BP68363 451 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 MTMR1Q13613 665 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 KIF22Q14807 665 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 XKR9Q5GH70 373 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 EMBQ6PCB8 327 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 TUBA1AQ71U36 451 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms