RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 CFAP100Q494V2 611 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 GPR158Q5T848 1215 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 MBNL2Q5VZF2 373 aaKnown RBP5.57□□□□□ -1.52
SCFD1-205ENST00000469043 IQSEC1Q6DN90 963 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 MMS22LQ6ZRQ5 1243 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 FAM43BQ6ZT52 329 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-205ENST00000469043 EPM2AIP1Q7L775 607 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-205ENST00000469043 BMP8AQ7Z5Y6 402 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 DDX53Q86TM3 631 aaKnown RBP5.57□□□□□ -1.52
SCFD1-205ENST00000469043 NME9Q86XW9 330 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 CPA6Q8N4T0 437 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 CCDC89Q8N998 374 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 PPHLN1Q8NEY8 458 aaKnown RBP5.57□□□□□ -1.52
SCFD1-205ENST00000469043 RPGRQ92834 1020 aaKnown RBP5.57□□□□□ -1.52
SCFD1-205ENST00000469043 LRGUKQ96M69 825 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 ZNF512Q96ME7 567 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-205ENST00000469043 GPR101Q96P66 508 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-205ENST00000469043 TUBGCP5Q96RT8 1024 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 NLRC4Q9NPP4 1024 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 POLR3BQ9NW08 1133 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-205ENST00000469043 TRPS1Q9UHF7 1281 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 SAP30BPQ9UHR5 308 aaKnown RBP5.57□□□□□ -1.52
SCFD1-205ENST00000469043 FZD1Q9UP38 647 aa5.57□□□□□ -1.52
SCFD1-205ENST00000469043 B4E1Z4 1266 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 M0R2C6 588 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 ABHD16AO95870 558 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 NUDT3O95989 172 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 MT-CO1P00395 513 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 LPOP22079 712 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-205ENST00000469043 ADRA1BP35368 520 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 IARSP41252 1262 aaKnown RBP5.56□□□□□ -1.52
SCFD1-205ENST00000469043 ADCY1Q08828 1119 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 GALEQ14376 348 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 CDCA2Q69YH5 1023 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-205ENST00000469043 ABHD17CQ6PCB6 329 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 HTR3DQ70Z44 454 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 SKAP1Q86WV1 359 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 CMTM4Q8IZR5 234 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 CBARPQ8N350 705 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-205ENST00000469043 MB21D1Q8N884 522 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 MDGA1Q8NFP4 955 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 PGBD4Q96DM1 585 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 MPP4Q96JB8 637 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 SLC13A1Q9BZW2 595 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 PCIF1Q9H4Z3 704 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 C14orf93Q9H972 538 aaKnown RBP5.56□□□□□ -1.52
SCFD1-205ENST00000469043 ANLNQ9NQW6 1124 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 DDX21Q9NR30 783 aaKnown RBP eCLIP5.56□□□□□ -1.52
SCFD1-205ENST00000469043 KLHL11Q9NVR0 708 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 DNAI1Q9UI46 699 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 PACSIN3Q9UKS6 424 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 DMTF1Q9Y222 760 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 TNFRSF18Q9Y5U5 241 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 PCSK5Q92824 1860 aa5.56□□□□□ -1.52
SCFD1-205ENST00000469043 RECQL4O94761 1208 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 ITGB1P05556 798 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 SETSIPP0DME0 302 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 GNAT2P19087 354 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 KIR2DL3P43628 341 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 RECQLP46063 649 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-205ENST00000469043 PUM3Q15397 648 aaKnown RBP5.55□□□□□ -1.52
SCFD1-205ENST00000469043 ZNF174Q15697 407 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 PRAMEF9Q5VWM5 478 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 UBE2R2Q712K3 238 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-205ENST00000469043 SRLQ86TD4 932 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 FAM186BQ8IYM0 893 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 CLASRPQ8N2M8 674 aaKnown RBP5.55□□□□□ -1.52
SCFD1-205ENST00000469043 PROKR1Q8TCW9 393 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 ST8SIA2Q92186 375 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 VOPP1Q96AW1 172 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 SKA1Q96BD8 255 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 MYD88Q99836 296 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 RIOX1Q9H6W3 641 aa5.55□□□□□ -1.52
SCFD1-205ENST00000469043 FBXO2Q9UK22 296 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-205ENST00000469043 ABHD14A-ACY1A0A1B0GW23 586 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 F5H423 210 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-205ENST00000469043 H7C1D1 291 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 LMNAP02545 664 aaKnown RBP5.54□□□□□ -1.52
SCFD1-205ENST00000469043 RENBPP51606 427 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 AK2P54819 239 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 SPIDRQ14159 915 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 SART3Q15020 963 aaKnown RBP5.54□□□□□ -1.52
SCFD1-205ENST00000469043 PCBP2Q15366 365 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCFD1-205ENST00000469043 MAN2A1Q16706 1144 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 TMEM240Q5SV17 173 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 NAIF1Q69YI7 327 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-205ENST00000469043 XRRA1Q6P2D8 792 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 RHOUQ7L0Q8 258 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 PNMA8AQ86V59 439 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-205ENST00000469043 VRK3Q8IV63 474 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 GPR150Q8NGU9 434 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 AIFM3Q96NN9 605 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 FAM193BQ96PV7 902 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-205ENST00000469043 ZNHIT2Q9UHR6 403 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 DGKBQ9Y6T7 804 aa5.54□□□□□ -1.52
SCFD1-205ENST00000469043 K7ESF4 209 aa5.53□□□□□ -1.52
SCFD1-205ENST00000469043 ANP32CO43423 234 aa5.53□□□□□ -1.52
SCFD1-205ENST00000469043 PROZP22891 400 aa5.53□□□□□ -1.52
SCFD1-205ENST00000469043 ZEB1P37275 1124 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-205ENST00000469043 MECP2P51608 486 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms