RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 USP15Q9Y4E8 981 aaPredicted RBP14.22□□□□□ -0.13
CLRN1-204ENST00000468836 CUTAO60888 179 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 ME1P48163 572 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 ZNF131P52739 623 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 ELAVL2Q12926 359 aaKnown RBP14.21□□□□□ -0.13
CLRN1-204ENST00000468836 KYAT1Q16773 422 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 ATL3Q6DD88 541 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 TMEM184AQ6ZMB5 413 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 CEP57Q86XR8 500 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 LRRC15Q8TF66 581 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 DDX12PQ92771 950 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 KLHL5Q96PQ7 755 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 PTPRHQ9HD43 1115 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLRN1-204ENST00000468836 FAM13BQ9NYF5 915 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 SEL1LQ9UBV2 794 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 TBX20Q9UMR3 447 aa14.21□□□□□ -0.13
CLRN1-204ENST00000468836 XIRP2A4UGR9 3374 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 F8W810 466 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 TRAPPC3O43617 180 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 B3GAT3O94766 335 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 KIF4AO95239 1232 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 CNPP09543 421 aaKnown RBP14.2□□□□□ -0.14
CLRN1-204ENST00000468836 GAP43P17677 238 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 PROZP22891 400 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 DSG1Q02413 1049 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 ZP2Q05996 745 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 ITIH3Q06033 890 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 MCL1Q07820 350 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 RARS2Q5T160 578 aaKnown RBP14.2□□□□□ -0.14
CLRN1-204ENST00000468836 SFR1Q86XK3 245 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 RIN2Q8WYP3 895 aaPredicted RBP14.2□□□□□ -0.14
CLRN1-204ENST00000468836 ZBTB45Q96K62 511 aaPredicted RBP14.2□□□□□ -0.14
CLRN1-204ENST00000468836 SNX27Q96L92 541 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 RIPOR3Q96MK2 946 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 MRPL44Q9H9J2 332 aaKnown RBP14.2□□□□□ -0.14
CLRN1-204ENST00000468836 CACNG4Q9UBN1 327 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 EXOC7Q9UPT5 735 aa14.2□□□□□ -0.14
CLRN1-204ENST00000468836 SMIM28A0A1B0GU29 152 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 TULP1O00294 542 aaPredicted RBP14.19□□□□□ -0.14
CLRN1-204ENST00000468836 BRD1O95696 1058 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 GLUD1P00367 558 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 CLTAP09496 248 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 EPCAMP16422 314 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 NMT1P30419 496 aaKnown RBP14.19□□□□□ -0.14
CLRN1-204ENST00000468836 AMPD3Q01432 767 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 PPP2R3AQ06190 1150 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 CBX2Q14781 532 aaPredicted RBP14.19□□□□□ -0.14
CLRN1-204ENST00000468836 SEZ6Q53EL9 994 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 HERC4Q5GLZ8 1057 aaPredicted RBP14.19□□□□□ -0.14
CLRN1-204ENST00000468836 FAM171A1Q5VUB5 890 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 PDXDC1Q6P996 788 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 TAS1R1Q7RTX1 841 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 MAP4K3Q8IVH8 894 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 CCDC65Q8IXS2 484 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 DHX58Q96C10 678 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 DDX27Q96GQ7 796 aaKnown RBP14.19□□□□□ -0.14
CLRN1-204ENST00000468836 FBXL18Q96ME1 805 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 PPP1R10Q96QC0 940 aaKnown RBP14.19□□□□□ -0.14
CLRN1-204ENST00000468836 PAAF1Q9BRP4 392 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 TTPALQ9BTX7 342 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 MSTO1Q9BUK6 570 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 PHF7Q9BWX1 381 aaPredicted RBP14.19□□□□□ -0.14
CLRN1-204ENST00000468836 GPR62Q9BZJ7 368 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 CUEDC2Q9H467 287 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 SFXN1Q9H9B4 322 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 NUB1Q9Y5A7 615 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 ATP6V1DQ9Y5K8 247 aa14.19□□□□□ -0.14
CLRN1-204ENST00000468836 REV3LO60673 3130 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 MYMKA6NI61 221 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 TEX28O15482 410 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 XPOTO43592 962 aaKnown RBP14.18□□□□□ -0.14
CLRN1-204ENST00000468836 GCNT3O95395 438 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 MTHFRP42898 656 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 CLCNKBP51801 687 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 DNM1Q05193 864 aaKnown RBP14.18□□□□□ -0.14
CLRN1-204ENST00000468836 PKP1Q13835 747 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 KCNC3Q14003 757 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 SYCE2Q6PIF2 218 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 DCLRE1AQ6PJP8 1040 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 STXBP4Q6ZWJ1 553 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 GLYCTKQ8IVS8 523 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 RNF168Q8IYW5 571 aaPredicted RBP14.18□□□□□ -0.14
CLRN1-204ENST00000468836 IQUBQ8NA54 791 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 HVCN1Q96D96 273 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 FAM212AQ96EL1 285 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 RPGRIP1Q96KN7 1286 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 B3GALT6Q96L58 329 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 NECTIN4Q96NY8 510 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 C1QTNF1Q9BXJ1 281 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 TNMDQ9H2S6 317 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 RPF1Q9H9Y2 349 aaKnown RBP14.18□□□□□ -0.14
CLRN1-204ENST00000468836 GOLGA2P5Q9HBQ8 144 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 TSHZ2Q9NRE2 1034 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 TBC1D7Q9P0N9 293 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 CNTN3Q9P232 1028 aa14.18□□□□□ -0.14
CLRN1-204ENST00000468836 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.18□□□□□ -0.14
CLRN1-204ENST00000468836 PODXLO00592 558 aa14.17□□□□□ -0.14
CLRN1-204ENST00000468836 ABLIM1O14639 778 aa14.17□□□□□ -0.14
CLRN1-204ENST00000468836 OGTO15294 1046 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms