RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 LACTBL1A8MY62 500 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 KCNJ18B7U540 433 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 C9IYK1 514 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 GOLGA6L19H0YKK7 550 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 M0QZ92 97 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 HNRNPDLO14979 420 aaKnown RBP6.48□□□□□ -1.37
USP39-213ENST00000467885 N4BP3O15049 544 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 CST3P01034 146 aaPredicted RBP6.48□□□□□ -1.37
USP39-213ENST00000467885 C4BPAP04003 597 aaKnown RBP6.48□□□□□ -1.37
USP39-213ENST00000467885 CLTAP09496 248 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 CLTBP09497 229 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 STAG3L1P0CL83 205 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 SFPQP23246 707 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP39-213ENST00000467885 EEF1GP26641 437 aaKnown RBP6.48□□□□□ -1.37
USP39-213ENST00000467885 GRM5P41594 1212 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 MRE11P49959 708 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 CYP2J2P51589 502 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 VAMP7P51809 220 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 ENPEPQ07075 957 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 PPP3CAQ08209 521 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 KCNMA1Q12791 1236 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 KCNJ12Q14500 433 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 ENOX2Q16206 610 aaKnown RBP6.48□□□□□ -1.37
USP39-213ENST00000467885 SNRNP35Q16560 246 aaKnown RBP6.48□□□□□ -1.37
USP39-213ENST00000467885 TPD52L1Q16890 204 aaPredicted RBP6.48□□□□□ -1.37
USP39-213ENST00000467885 TSR1Q2NL82 804 aaKnown RBP6.48□□□□□ -1.37
USP39-213ENST00000467885 VWA3BQ502W6 1294 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 XKR4Q5GH76 650 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 CEP135Q66GS9 1140 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 ARMCX5Q6P1M9 558 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 SLC27A1Q6PCB7 646 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 SARM1Q6SZW1 724 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 C15orf39Q6ZRI6 1047 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 PACS2Q86VP3 889 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 CREBRFQ8IUR6 639 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 THNSL1Q8IYQ7 743 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 GPD1LQ8N335 351 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 CEP120Q8N960 986 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 GSTCDQ8NEC7 633 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 SAAL1Q96ER3 474 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 BICD1Q96G01 975 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 SCLYQ96I15 445 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 SCLT1Q96NL6 688 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 ADAM2Q99965 735 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 MSTO1Q9BUK6 570 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 VPS16Q9H269 839 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 METTL14Q9HCE5 456 aaKnown RBP6.48□□□□□ -1.37
USP39-213ENST00000467885 PDE11AQ9HCR9 933 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 INTS13Q9NVM9 706 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 MIOSQ9NXC5 875 aa6.48□□□□□ -1.37
USP39-213ENST00000467885 ARMCX3Q9UH62 379 aaPredicted RBP6.48□□□□□ -1.37
USP39-213ENST00000467885 CCDC85CA6NKD9 419 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 PMM2O15305 246 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 SLC16A3O15427 465 aaKnown RBP6.47□□□□□ -1.37
USP39-213ENST00000467885 LRRN2O75325 713 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 ERLIN2O94905 339 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 PARNO95453 639 aaKnown RBP6.47□□□□□ -1.37
USP39-213ENST00000467885 NPTXRO95502 500 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 EOMESO95936 686 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 ZSCAN20P17040 1043 aaPredicted RBP6.47□□□□□ -1.37
USP39-213ENST00000467885 PBX1P40424 430 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 AFF1P51825 1210 aaKnown RBP6.47□□□□□ -1.37
USP39-213ENST00000467885 COPB1P53618 953 aaKnown RBP6.47□□□□□ -1.37
USP39-213ENST00000467885 UBASH3AP57075 661 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 OSTNP61366 133 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 CYP24A1Q07973 514 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 KCNH2Q12809 1159 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 PSMD6Q15008 389 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 MFSD5Q6N075 450 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 NOTUMQ6P988 496 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 AGMOQ6ZNB7 445 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 SLC24A5Q71RS6 500 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 ZNF598Q86UK7 904 aaKnown RBP6.47□□□□□ -1.37
USP39-213ENST00000467885 FAM114A1Q8IWE2 563 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 FAM186BQ8IYM0 893 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 CCDC155Q8N6L0 562 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 LMO3Q8TAP4 145 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 CXorf38Q8TB03 319 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 LINC01599Q8WXQ3 324 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 SLC35C1Q96A29 364 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 CCDC51Q96ER9 411 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 CNOT6LQ96LI5 555 aaKnown RBP6.47□□□□□ -1.37
USP39-213ENST00000467885 ACAP3Q96P50 834 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 IFIH1Q9BYX4 1025 aaKnown RBP6.47□□□□□ -1.37
USP39-213ENST00000467885 PPP1R12CQ9BZL4 782 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 PRKD2Q9BZL6 878 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 XPO4Q9C0E2 1151 aaKnown RBP6.47□□□□□ -1.37
USP39-213ENST00000467885 NDST4Q9H3R1 872 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 ASB7Q9H672 318 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 PLEKHA5Q9HAU0 1116 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 SNTG2Q9NY99 539 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 IFNKQ9P0W0 207 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 FRMD4BQ9Y2L6 1034 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 HES2Q9Y543 173 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 IPPQ9Y573 584 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 PCDHB2Q9Y5E7 798 aa6.47□□□□□ -1.37
USP39-213ENST00000467885 MYH9P35579 1960 aaKnown RBP6.47□□□□□ -1.37
USP39-213ENST00000467885 WDR81Q562E7 1941 aa6.46□□□□□ -1.37
USP39-213ENST00000467885 SMIM28A0A1B0GU29 152 aa6.46□□□□□ -1.38
USP39-213ENST00000467885 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms