RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 KRBA1A5PL33 1030 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 GNL2Q13823 731 aaKnown RBP19.03■□□□□ 0.64
TRIM56-203ENST00000467847 ANGPT1Q15389 498 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 NAB2Q15742 525 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 TTC38Q5R3I4 469 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 LIN9Q5TKA1 542 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 EEF1DP3Q658K8 133 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 HAUS3Q68CZ6 603 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 LNX1Q8TBB1 728 aaPredicted RBP19.03■□□□□ 0.64
TRIM56-203ENST00000467847 IFT74Q96LB3 600 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 CLSTN3Q9BQT9 956 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 KIFC3Q9BVG8 833 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 LIMCH1Q9UPQ0 1083 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 GDAQ9Y2T3 454 aa19.03■□□□□ 0.64
TRIM56-203ENST00000467847 EDN1P05305 212 aa19.02■□□□□ 0.64
TRIM56-203ENST00000467847 MUTP22033 750 aa19.02■□□□□ 0.64
TRIM56-203ENST00000467847 FSHRP23945 695 aa19.02■□□□□ 0.64
TRIM56-203ENST00000467847 CCT6AP40227 531 aaKnown RBP19.02■□□□□ 0.64
TRIM56-203ENST00000467847 EFNA5P52803 228 aa19.02■□□□□ 0.64
TRIM56-203ENST00000467847 ELAVL2Q12926 359 aaKnown RBP19.02■□□□□ 0.64
TRIM56-203ENST00000467847 HTR4Q13639 388 aa19.02■□□□□ 0.64
TRIM56-203ENST00000467847 DCAF4L1Q3SXM0 396 aa19.02■□□□□ 0.64
TRIM56-203ENST00000467847 PDXDC1Q6P996 788 aa19.02■□□□□ 0.64
TRIM56-203ENST00000467847 GRASPQ7Z6J2 395 aaPredicted RBP19.02■□□□□ 0.64
TRIM56-203ENST00000467847 GPR152Q8TDT2 470 aa19.02■□□□□ 0.64
TRIM56-203ENST00000467847 LLPHQ9BRT6 129 aaKnown RBP19.02■□□□□ 0.64
TRIM56-203ENST00000467847 TBC1D17Q9HA65 648 aa19.02■□□□□ 0.64
TRIM56-203ENST00000467847 WDR87Q6ZQQ6 2873 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 ANHXE9PGG2 379 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 C8AP07357 584 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 HNRNPA1P09651 372 aaKnown RBP eCLIP19.01■□□□□ 0.63
TRIM56-203ENST00000467847 RBM25P49756 843 aaKnown RBP19.01■□□□□ 0.63
TRIM56-203ENST00000467847 ECM1Q16610 540 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 PPM1LQ5SGD2 360 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 ST13P5Q8NFI4 369 aaPredicted RBP19.01■□□□□ 0.63
TRIM56-203ENST00000467847 KCNG4Q8TDN1 519 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 KIFAP3Q92845 792 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 BHMT2Q9H2M3 363 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 POLD4Q9HCU8 107 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 ZFP37Q9Y6Q3 630 aaPredicted RBP19.01■□□□□ 0.63
TRIM56-203ENST00000467847 NUMBLQ9Y6R0 609 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 MYH15Q9Y2K3 1946 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 GVINP1Q7Z2Y8 2422 aa19.01■□□□□ 0.63
TRIM56-203ENST00000467847 ADAM12O43184 909 aa19■□□□□ 0.63
TRIM56-203ENST00000467847 SEC24BO95487 1268 aa19■□□□□ 0.63
TRIM56-203ENST00000467847 FXR2P51116 673 aaKnown RBP eCLIP19■□□□□ 0.63
TRIM56-203ENST00000467847 GLRA4Q5JXX5 417 aa19■□□□□ 0.63
TRIM56-203ENST00000467847 ATF7IP2Q5U623 682 aa19■□□□□ 0.63
TRIM56-203ENST00000467847 PDZRN4Q6ZMN7 1036 aaPredicted RBP19■□□□□ 0.63
TRIM56-203ENST00000467847 APBB1IPQ7Z5R6 666 aaPredicted RBP19■□□□□ 0.63
TRIM56-203ENST00000467847 FBXO18Q8NFZ0 1043 aa19■□□□□ 0.63
TRIM56-203ENST00000467847 LRWD1Q9UFC0 647 aa19■□□□□ 0.63
TRIM56-203ENST00000467847 NOL7Q9UMY1 257 aaKnown RBP19■□□□□ 0.63
TRIM56-203ENST00000467847 POLIQ9UNA4 740 aa19■□□□□ 0.63
TRIM56-203ENST00000467847 CCL16O15467 120 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 XYLBO75191 536 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 B3GAT3O94766 335 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 TRAPPC10P48553 1259 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 NTHL1P78549 312 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 NBR1Q14596 966 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 NT5DC1Q5TFE4 455 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 FAM184AQ8NB25 1140 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 SLC7A14Q8TBB6 771 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 ARHGEF3Q9NR81 526 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 DAXXQ9UER7 740 aaPredicted RBP18.99■□□□□ 0.63
TRIM56-203ENST00000467847 CDH7Q9ULB5 785 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 KIAA1024Q9UPX6 916 aa18.99■□□□□ 0.63
TRIM56-203ENST00000467847 TMEM189-UBE2V1I3L0A0 370 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 K7ERI5 159 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 FGFR3P22607 806 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 HOXA9P31269 272 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 OR1D2P34982 312 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 CLCNKBP51801 687 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 HMGN5P82970 282 aaKnown RBP18.98■□□□□ 0.63
TRIM56-203ENST00000467847 SPECC1Q5M775 1068 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 AXDND1Q5T1B0 1012 aaPredicted RBP18.98■□□□□ 0.63
TRIM56-203ENST00000467847 DCLRE1AQ6PJP8 1040 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 C4orf32Q8N8J7 132 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 FGF14Q92915 247 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 UROC1Q96N76 676 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 PPP1R10Q96QC0 940 aaKnown RBP18.98■□□□□ 0.63
TRIM56-203ENST00000467847 SLC2A4RGQ9NR83 387 aa18.98■□□□□ 0.63
TRIM56-203ENST00000467847 DDX19AQ9NUU7 478 aaKnown RBP18.98■□□□□ 0.63
TRIM56-203ENST00000467847 CCDC169A6NNP5 214 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 RAB33AQ14088 237 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 PHLDB3Q6NSJ2 640 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 PARM1Q6UWI2 310 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 SNX29Q8TEQ0 813 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 FGF13Q92913 245 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 RPP25Q9BUL9 199 aaKnown RBP18.97■□□□□ 0.63
TRIM56-203ENST00000467847 RAB34Q9BZG1 259 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 GOLGA2P5Q9HBQ8 144 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 MTRRQ9UBK8 725 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 TNFSF13BQ9Y275 285 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 SIT1Q9Y3P8 196 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 STK24Q9Y6E0 443 aa18.97■□□□□ 0.63
TRIM56-203ENST00000467847 TRAPPC3O43617 180 aa18.96■□□□□ 0.63
TRIM56-203ENST00000467847 DCNP07585 359 aaKnown RBP18.96■□□□□ 0.63
TRIM56-203ENST00000467847 IGFBP6P24592 240 aaPredicted RBP18.96■□□□□ 0.63
TRIM56-203ENST00000467847 YARSP54577 528 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms