RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 TLE1Q04724 770 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 DLX2Q07687 328 aaPredicted RBP5.07□□□□□ -1.6
VPS13A-209ENST00000467124 POLD3Q15054 466 aaPredicted RBP5.07□□□□□ -1.6
VPS13A-209ENST00000467124 LONRF3Q496Y0 759 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 FLYWCH1Q4VC44 716 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 VWA3BQ502W6 1294 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 ZNF385BQ569K4 471 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 PRAMEF14Q5SWL7 426 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 THEMIS2Q5TEJ8 643 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 KLHDC7AQ5VTJ3 777 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 TRIM68Q6AZZ1 485 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 MCTP2Q6DN12 878 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 SYDE1Q6ZW31 735 aaPredicted RBP5.07□□□□□ -1.6
VPS13A-209ENST00000467124 PPP1R3BQ86XI6 285 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 TRMT2AQ8IZ69 625 aaKnown RBP5.07□□□□□ -1.6
VPS13A-209ENST00000467124 CCDC33Q8N5R6 958 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 ENAHQ8N8S7 591 aaPredicted RBP5.07□□□□□ -1.6
VPS13A-209ENST00000467124 OR7D4Q8NG98 312 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 IL31RAQ8NI17 732 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 TNPO1Q92973 898 aaKnown RBP5.07□□□□□ -1.6
VPS13A-209ENST00000467124 AJUBAQ96IF1 538 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 YTHDC1Q96MU7 727 aaKnown RBP5.07□□□□□ -1.6
VPS13A-209ENST00000467124 P2RX7Q99572 595 aaKnown RBP5.07□□□□□ -1.6
VPS13A-209ENST00000467124 MYOCQ99972 504 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 CRB3Q9BUF7 120 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 NUP62CLQ9H1M0 184 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 VPS11Q9H270 941 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 KIAA1586Q9HCI6 787 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 CD320Q9NPF0 282 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 LANCL2Q9NS86 450 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 GJB4Q9NTQ9 266 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 GPRC5DQ9NZD1 345 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 FEZ2Q9UHY8 353 aaPredicted RBP5.07□□□□□ -1.6
VPS13A-209ENST00000467124 OGDHLQ9ULD0 1010 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 ZDHHC9Q9Y397 364 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 PCDHGB2Q9Y5G2 931 aa5.07□□□□□ -1.6
VPS13A-209ENST00000467124 RASA4BC9J798 803 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 F8W8V4 182 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 MTSS1O43312 755 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 RASA4O43374 803 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 TOX4O94842 621 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 SBK3P0C264 359 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 HDCP19113 662 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 PI3P19957 117 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 PAX3P23760 479 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 TM4SF4P48230 202 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 SUMO3P55854 103 aaPredicted RBP5.06□□□□□ -1.6
VPS13A-209ENST00000467124 BPIFB4P59827 614 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 GPSM2P81274 684 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 SSPNQ14714 243 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 ZRSR2Q15696 482 aaKnown RBP5.06□□□□□ -1.6
VPS13A-209ENST00000467124 TBR1Q16650 682 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 TUBB8Q3ZCM7 444 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 INO80DQ53TQ3 878 aaPredicted RBP5.06□□□□□ -1.6
VPS13A-209ENST00000467124 KHDC1LQ5JSQ8 128 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 KRT40Q6A162 431 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 GGT6Q6P531 493 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 CCDC174Q6PII3 467 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 C11orf96Q7Z7L8 435 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 KLHL36Q8N4N3 616 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 DCBLD1Q8N8Z6 715 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 ANKRD42Q8N9B4 389 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 MTFMTQ96DP5 389 aaKnown RBP5.06□□□□□ -1.6
VPS13A-209ENST00000467124 APIPQ96GX9 242 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 PWWP2AQ96N64 755 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 KRTAP4-12Q9BQ66 201 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 CARD11Q9BXL7 1154 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 CERS4Q9HA82 394 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 ZNF287Q9HBT7 754 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 BARX1Q9HBU1 254 aaPredicted RBP5.06□□□□□ -1.6
VPS13A-209ENST00000467124 JADE2Q9NQC1 790 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 GPRC5BQ9NZH0 403 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 CNOT6Q9ULM6 557 aaKnown RBP5.06□□□□□ -1.6
VPS13A-209ENST00000467124 KCTD3Q9Y597 815 aa5.06□□□□□ -1.6
VPS13A-209ENST00000467124 ZMYM3Q14202 1370 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 TBX3O15119 743 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 SLC16A6O15403 523 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 PHGDHO43175 533 aaKnown RBP5.05□□□□□ -1.6
VPS13A-209ENST00000467124 SGTAO43765 313 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 PIP5K1CO60331 668 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 CYP1A1P04798 512 aaPredicted RBP5.05□□□□□ -1.6
VPS13A-209ENST00000467124 CD1AP06126 327 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 RAP2AP10114 183 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 HALP42357 657 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 STT3AP46977 705 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 ALDH1A3P47895 512 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 CASP5P51878 434 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 DUSP2Q05923 314 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 EXOSC9Q06265 439 aaKnown RBP5.05□□□□□ -1.6
VPS13A-209ENST00000467124 ZNF543Q08ER8 600 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 VMACQ2NL98 169 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 C4orf46Q504U0 113 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 C19orf54Q5BKX5 351 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 ZMAT1Q5H9K5 638 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 C3orf38Q5JPI3 329 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 FAM209BQ5JX69 171 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 ATG14Q6ZNE5 492 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 Q6ZUG5 572 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 KRT78Q8N1N4 520 aa5.05□□□□□ -1.6
VPS13A-209ENST00000467124 OR2C3Q8N628 320 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms