RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CEP95Q96GE4 821 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 ADAM2Q99965 735 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 POGKQ9P215 609 aa6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 NOC2LQ9Y3T9 749 aaKnown RBP6.11□□□□□ -1.43
PRPF40A-205ENST00000467114 ALG1L2C9J202 215 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 HLA-DOAP06340 250 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 LPLP06858 475 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 HKR1P10072 659 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 DDX6P26196 483 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 SEC24CP53992 1094 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 LGALS4P56470 323 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 BLOC1S1P78537 153 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 MRPS21P82921 87 aaKnown RBP6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 FSCN1Q16658 493 aaKnown RBP6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 MFSD14BQ5SR56 506 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 KCNK18Q7Z418 384 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 HDGFL2Q7Z4V5 671 aaPredicted RBP6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 CMTR2Q8IYT2 770 aaKnown RBP6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 CNTD1Q8N815 330 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 RNF169Q8NCN4 708 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 ZFP28Q8NHY6 868 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 ZNF480Q8WV37 535 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 ASPSCR1Q9BZE9 553 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 PRDM13Q9H4Q3 707 aa6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 TYW1Q9NV66 732 aaKnown RBP6.1□□□□□ -1.43
PRPF40A-205ENST00000467114 TRIM75PA6NK02 468 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 GABRDO14764 452 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 PJA2O43164 708 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 NCLP19338 710 aaKnown RBP6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 IL12RB1P42701 662 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 FLT3LGP49771 235 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 GUCY2FP51841 1108 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 FOXI1Q12951 378 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 BRDTQ58F21 947 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 CT83Q5H943 113 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 PRAMEF14Q5SWL7 426 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 ABHD17BQ5VST6 288 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 SYCE2Q6PIF2 218 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 NEU1Q99519 415 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 C14orf119Q9NWQ9 140 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 COX11Q9Y6N1 276 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 FPGT-TNNI3KV9GXZ4 949 aa6.09□□□□□ -1.43
PRPF40A-205ENST00000467114 COL11A2P13942 1736 aaPredicted RBP6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 RPTORQ8N122 1335 aa6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 UNC119BA6NIH7 251 aa6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 MASP2O00187 686 aa6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 PHF2O75151 1096 aa6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 EGR2P11161 476 aaPredicted RBP6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 C21orf58P58505 322 aa6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 HNRNPA0Q13151 305 aaKnown RBP6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 TP53BP2Q13625 1128 aa6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 PRR16Q569H4 304 aa6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 FAM47AQ5JRC9 791 aa6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 ARMC6Q6NXE6 501 aa6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 AHCYL2Q96HN2 611 aaKnown RBP6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 ACAP3Q96P50 834 aa6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 USP15Q9Y4E8 981 aaPredicted RBP6.08□□□□□ -1.44
PRPF40A-205ENST00000467114 DRGXA6NNA5 263 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 KATNA1O75449 491 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 SPDEFO95238 335 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 CFIP05156 583 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 ENPP1P22413 925 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 MTNR1BP49286 362 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 KLF1Q13351 362 aaPredicted RBP6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 UGT8Q16880 541 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 MST1LQ2TV78 715 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 COLEC12Q5KU26 742 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 SYDE2Q5VT97 1194 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 AGAP9Q5VTM2 703 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 SLC35B2Q8TB61 432 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 ASB10Q8WXI3 467 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 CAVIN3Q969G5 261 aa6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 EAF2Q96CJ1 260 aaPredicted RBP6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 CCDC8Q9H0W5 538 aaPredicted RBP6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 DDX56Q9NY93 547 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-205ENST00000467114 hCG_2014768A0A024R1R8 64 aa6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 CD38P28907 300 aa6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 CLRN1P58418 232 aa6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 KRT85P78386 507 aa6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 RESTQ13127 1097 aa6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 ATXN7L2Q5T6C5 722 aaPredicted RBP6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 R3HDMLQ9H3Y0 253 aa6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 ALG13Q9NP73 1137 aaKnown RBP6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 ZNF277Q9NRM2 450 aaPredicted RBP6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 HOMER2Q9NSB8 354 aa6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 TRHDEQ9UKU6 1024 aa6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 MAP3K2Q9Y2U5 619 aa6.06□□□□□ -1.44
PRPF40A-205ENST00000467114 TNKSO95271 1327 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 CXorf49A8MYA2 514 aaPredicted RBP6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 ADCY6O43306 1168 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 PCDHGA12O60330 932 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 ESRRBO95718 433 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 IBSPP21815 317 aaPredicted RBP6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 CHN2P52757 468 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 IGBP1P78318 339 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 EXOSC10Q01780 885 aaKnown RBP6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 ZNF572Q7Z3I7 529 aaPredicted RBP6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 RD3Q7Z3Z2 195 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 RHOT2Q8IXI1 618 aa6.05□□□□□ -1.44
PRPF40A-205ENST00000467114 C1orf162Q8NEQ5 155 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms