RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 TMEM98Q9Y2Y6 226 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 NOSIPQ9Y314 301 aaKnown RBP6.36□□□□□ -1.39
LRCH3-212ENST00000466845 AFG3L2Q9Y4W6 797 aa6.36□□□□□ -1.39
LRCH3-212ENST00000466845 ARAP3Q8WWN8 1544 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 RAD50Q92878 1312 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 PDPK1O15530 556 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 APBB3O95704 486 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 KRT10P13645 584 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 ZNF24P17028 368 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 ITGA1P56199 1179 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 CTAG1AP78358 180 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 MRPS35P82673 323 aaKnown RBP6.35□□□□□ -1.39
LRCH3-212ENST00000466845 TRAF1Q13077 416 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 PRKG2Q13237 762 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 RASA2Q15283 850 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 SURF1Q15526 300 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 ELF2Q15723 593 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 CR1LQ2VPA4 569 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 GFOD2Q3B7J2 385 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 RRP12Q5JTH9 1297 aaKnown RBP6.35□□□□□ -1.39
LRCH3-212ENST00000466845 BORAQ6PGQ7 559 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 USP51Q70EK9 711 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 RBM12BQ8IXT5 1001 aaKnown RBP6.35□□□□□ -1.39
LRCH3-212ENST00000466845 CARNMT1Q8N4J0 409 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 HDAC7Q8WUI4 952 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 STON2Q8WXE9 905 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 TBATAQ96M53 351 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 SPATA9Q9BWV2 254 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 CDIP1Q9H305 208 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 ARHGEF4Q9NR80 690 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 ANKEF1Q9NU02 776 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 PSD3Q9NYI0 1048 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 CEP72Q9P209 647 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 ARHGAP28Q9P2N2 729 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 ASH2LQ9UBL3 628 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 ZNF112Q9UJU3 913 aa6.35□□□□□ -1.39
LRCH3-212ENST00000466845 ARHGAP35Q9NRY4 1499 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 CLIP1P30622 1438 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 A0A1B0GTL3 188 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 SYNDIG1LA6NDD5 238 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 FAM47E-STBD1D6RA91 191 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 M0QX08 132 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 APAF1O14727 1248 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 NEMFO60524 1076 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 KLHL41O60662 606 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 KATNA1O75449 491 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 GFPT2O94808 682 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 BAG2O95816 211 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 DESP17661 470 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 HOXD12P35452 270 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 KRT20P35900 424 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 CD86P42081 329 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 MAN2A2P49641 1150 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 MXI1P50539 228 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 ZNF280AP59817 542 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-212ENST00000466845 PLP2Q04941 152 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 SMAD4Q13485 552 aaKnown RBP6.34□□□□□ -1.39
LRCH3-212ENST00000466845 PIN1Q13526 163 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-212ENST00000466845 ARHGEF6Q15052 776 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 SF3B3Q15393 1217 aaKnown RBP6.34□□□□□ -1.39
LRCH3-212ENST00000466845 SPATS1Q496A3 300 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 PRR31Q5SQ13 230 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 CCDC122Q5T0U0 273 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 BTN2A1Q7KYR7 527 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 TBC1D1Q86TI0 1168 aaPredicted RBP6.34□□□□□ -1.39
LRCH3-212ENST00000466845 THNSL2Q86YJ6 484 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 ADGRG2Q8IZP9 1017 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 LGI4Q8N135 537 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 VPS52Q8N1B4 723 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 NUP133Q8WUM0 1156 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 OSBP2Q969R2 916 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 NAF1Q96HR8 494 aaKnown RBP6.34□□□□□ -1.39
LRCH3-212ENST00000466845 RSRC1Q96IZ7 334 aaKnown RBP6.34□□□□□ -1.39
LRCH3-212ENST00000466845 ETAA1Q9NY74 926 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 CHMP5Q9NZZ3 219 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 CTNNA3Q9UI47 895 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 FBXL7Q9UJT9 491 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 KIF14Q15058 1648 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 TTC37Q6PGP7 1564 aa6.34□□□□□ -1.39
LRCH3-212ENST00000466845 FANCAO15360 1455 aa6.34□□□□□ -1.4
LRCH3-212ENST00000466845 MROH6A6NGR9 719 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 CCDC85CA6NKD9 419 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 VSTM5A8MXK1 200 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 PLOD2O00469 737 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 AQP7O14520 342 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 KPNA6O60684 536 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 CDKL5O76039 1030 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 FGFR1OPO95684 399 aaKnown RBP6.33□□□□□ -1.4
LRCH3-212ENST00000466845 CHGBP05060 677 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 CYP17A1P05093 508 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 KRT13P13646 458 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 RPS2P15880 293 aaKnown RBP6.33□□□□□ -1.4
LRCH3-212ENST00000466845 CD9P21926 228 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 GRK3P35626 688 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 STAT3P40763 770 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 LIMK1P53667 647 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 TMF1P82094 1093 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 LRRC74AQ0VAA2 488 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 TNIP1Q15025 636 aa6.33□□□□□ -1.4
LRCH3-212ENST00000466845 PLCB4Q15147 1175 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms