RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PALMO75781 387 aa9.21□□□□□ -0.94
HPS4-209ENST00000466781 TAP1Q03518 808 aa9.21□□□□□ -0.94
HPS4-209ENST00000466781 NR1H3Q13133 447 aa9.21□□□□□ -0.94
HPS4-209ENST00000466781 PDCLQ13371 301 aa9.21□□□□□ -0.94
HPS4-209ENST00000466781 RGS9BPQ6ZS82 235 aa9.21□□□□□ -0.94
HPS4-209ENST00000466781 EPM2AIP1Q7L775 607 aaPredicted RBP9.21□□□□□ -0.94
HPS4-209ENST00000466781 PITPNM3Q9BZ71 974 aa9.21□□□□□ -0.94
HPS4-209ENST00000466781 INTS2Q9H0H0 1204 aaKnown RBP9.21□□□□□ -0.94
HPS4-209ENST00000466781 SH3BP1Q9Y3L3 701 aa9.21□□□□□ -0.94
HPS4-209ENST00000466781 CCDC188H7C350 402 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 ATP8B1O43520 1251 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 AKT1P31749 480 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 COASYQ13057 564 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 GRM4Q14833 912 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 FASTKD1Q53R41 847 aaKnown RBP9.2□□□□□ -0.94
HPS4-209ENST00000466781 ANKRD13AQ8IZ07 590 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 PROM2Q8N271 834 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 PAWRQ96IZ0 340 aaKnown RBP9.2□□□□□ -0.94
HPS4-209ENST00000466781 CCDC90BQ9GZT6 254 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 RBAKQ9NYW8 714 aaPredicted RBP9.2□□□□□ -0.94
HPS4-209ENST00000466781 PXDNLA1KZ92 1463 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 RASA4BC9J798 803 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 RASA4O43374 803 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 TPI1P60174 286 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 E2F5Q15329 346 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 TMCO5AQ8N6Q1 288 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 STKLD1Q8NE28 680 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 FAM129AQ9BZQ8 928 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 ZSCAN32Q9NX65 697 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 ZFP69BQ9UJL9 534 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 A0A087WUV0 522 aaPredicted RBP9.2□□□□□ -0.94
HPS4-209ENST00000466781 UBXN8O00124 270 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 PRRG1O14668 218 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 UPP2O95045 317 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 KRT8P05787 483 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 HIST1H2AGP0C0S8 130 aaPredicted RBP9.2□□□□□ -0.94
HPS4-209ENST00000466781 HIST1H2ADP20671 130 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 HMOX2P30519 316 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 LIFRP42702 1097 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 CDC42EP1Q00587 391 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 ADGRF4Q8IZF3 695 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 FAM151AQ8WW52 585 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 HIST1H2AHQ96KK5 128 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 KIF2CQ99661 725 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 HIST1H2AJQ99878 128 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 H2AFJQ9BTM1 129 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 MUC3BQ9H195 1237 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 POLD4Q9HCU8 107 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 ADA2Q9NZK5 511 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 EHD2Q9NZN4 543 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 SLC9A2Q9UBY0 812 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 RFX7Q2KHR2 1363 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 POLR1AO95602 1720 aaPredicted RBP9.2□□□□□ -0.94
HPS4-209ENST00000466781 VWDEQ8N2E2 1590 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 POTEMA6NI47 508 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 PIK3R2O00459 728 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 TFRCP02786 760 aaKnown RBP9.2□□□□□ -0.94
HPS4-209ENST00000466781 HSD17B4P51659 736 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 DAB2P98082 770 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 MAP3K10Q02779 954 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 ARHGEF7Q14155 803 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 TRIM72Q6ZMU5 477 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 TBC1D1Q86TI0 1168 aaPredicted RBP9.2□□□□□ -0.94
HPS4-209ENST00000466781 BTBD6Q96KE9 485 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 DNAJC7Q99615 494 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 RUBCNLQ9H714 662 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 PLAAQ9Y263 795 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 GYG2O15488 501 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 PSMD3O43242 534 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 MMP14P50281 582 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 COG2Q14746 738 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 NBPF20Q3BBV1 942 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 NUGGCQ68CJ6 796 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 VSTM4Q8IW00 320 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 APPL2Q8NEU8 664 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 PHF21AQ96BD5 680 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
HPS4-209ENST00000466781 SPATA16Q9BXB7 569 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 MAD2L2Q9UI95 211 aa9.2□□□□□ -0.94
HPS4-209ENST00000466781 DIAPH2O60879 1101 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 PPP3CCP48454 512 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 KRT31Q15323 416 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 MAPRE2Q15555 327 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 PFKFB3Q16875 520 aaPredicted RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 ARHGAP15Q53QZ3 475 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 PPM1NQ8N819 430 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 ZNF513Q8N8E2 541 aaPredicted RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 NSUN4Q96CB9 384 aaKnown RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 LXNQ9BS40 222 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 YY1AP1Q9H869 796 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 FLT1P17948 1338 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 ARHGAP23Q9P227 1491 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 F5H6K3 240 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 KDM1AO60341 852 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 KLRC3Q07444 240 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 PDAP1Q13442 181 aaKnown RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 USP17L6PQ6QN14 398 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 SCFD1Q8WVM8 642 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 THOC1Q96FV9 657 aaKnown RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 BFARQ9NZS9 450 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms