RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 RAD51AP2Q09MP3 1159 aa19.24■□□□□ 0.67
COL7A1-206ENST00000466591 TDGQ13569 410 aa19.24■□□□□ 0.67
COL7A1-206ENST00000466591 IER5LQ5T953 404 aa19.24■□□□□ 0.67
COL7A1-206ENST00000466591 GPR65Q8IYL9 337 aa19.24■□□□□ 0.67
COL7A1-206ENST00000466591 RNF168Q8IYW5 571 aaPredicted RBP19.24■□□□□ 0.67
COL7A1-206ENST00000466591 FLCNQ8NFG4 579 aa19.24■□□□□ 0.67
COL7A1-206ENST00000466591 NT5C3AQ9H0P0 336 aa19.24■□□□□ 0.67
COL7A1-206ENST00000466591 SMOC2Q9H3U7 446 aa19.24■□□□□ 0.67
COL7A1-206ENST00000466591 ZDHHC7Q9NXF8 308 aa19.24■□□□□ 0.67
COL7A1-206ENST00000466591 RBM19Q9Y4C8 960 aaKnown RBP19.24■□□□□ 0.67
COL7A1-206ENST00000466591 PTGESO14684 152 aa19.23■□□□□ 0.67
COL7A1-206ENST00000466591 RTP2Q5QGT7 225 aa19.23■□□□□ 0.67
COL7A1-206ENST00000466591 PPM1LQ5SGD2 360 aa19.23■□□□□ 0.67
COL7A1-206ENST00000466591 ATOH1Q92858 354 aaPredicted RBP19.23■□□□□ 0.67
COL7A1-206ENST00000466591 BICD1Q96G01 975 aa19.23■□□□□ 0.67
COL7A1-206ENST00000466591 UROC1Q96N76 676 aa19.23■□□□□ 0.67
COL7A1-206ENST00000466591 PLIN2Q99541 437 aa19.23■□□□□ 0.67
COL7A1-206ENST00000466591 TIPINQ9BVW5 301 aa19.23■□□□□ 0.67
COL7A1-206ENST00000466591 WDR6Q9NNW5 1121 aaKnown RBP19.23■□□□□ 0.67
COL7A1-206ENST00000466591 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.23■□□□□ 0.67
COL7A1-206ENST00000466591 SLC38A7Q9NVC3 462 aa19.23■□□□□ 0.67
COL7A1-206ENST00000466591 IGSF9Q9P2J2 1179 aa19.23■□□□□ 0.67
COL7A1-206ENST00000466591 TNFSF13BQ9Y275 285 aa19.23■□□□□ 0.67
COL7A1-206ENST00000466591 PDGFBP01127 241 aaPredicted RBP19.22■□□□□ 0.67
COL7A1-206ENST00000466591 NT5DC1Q5TFE4 455 aa19.22■□□□□ 0.67
COL7A1-206ENST00000466591 PRSS33Q8NF86 280 aa19.22■□□□□ 0.67
COL7A1-206ENST00000466591 RUSC1Q9BVN2 902 aa19.22■□□□□ 0.67
COL7A1-206ENST00000466591 C17orf75Q9HAS0 396 aa19.22■□□□□ 0.67
COL7A1-206ENST00000466591 KCNK12Q9HB15 430 aa19.22■□□□□ 0.67
COL7A1-206ENST00000466591 ANKFY1Q9P2R3 1169 aa19.22■□□□□ 0.67
COL7A1-206ENST00000466591 MUC6Q6W4X9 2439 aa19.22■□□□□ 0.67
COL7A1-206ENST00000466591 SFI1A8K8P3 1242 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 SLC16A4O15374 487 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 XYLBO75191 536 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 C1RP00736 705 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 EDN1P05305 212 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 KRT18P05783 430 aaKnown RBP19.21■□□□□ 0.67
COL7A1-206ENST00000466591 LARP1BQ659C4 914 aaKnown RBP19.21■□□□□ 0.67
COL7A1-206ENST00000466591 RINT1Q6NUQ1 792 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 DCLRE1AQ6PJP8 1040 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.21■□□□□ 0.67
COL7A1-206ENST00000466591 PIK3R5Q8WYR1 880 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 CALML4Q96GE6 196 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 ACAP3Q96P50 834 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 ACO2Q99798 780 aaKnown RBP19.21■□□□□ 0.67
COL7A1-206ENST00000466591 PRKD2Q9BZL6 878 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 TMEM134Q9H6X4 195 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.21■□□□□ 0.67
COL7A1-206ENST00000466591 NUB1Q9Y5A7 615 aa19.21■□□□□ 0.67
COL7A1-206ENST00000466591 PLXNA3P51805 1871 aa19.2■□□□□ 0.66
COL7A1-206ENST00000466591 ZMYND10O75800 440 aa19.2■□□□□ 0.66
COL7A1-206ENST00000466591 C8AP07357 584 aa19.2■□□□□ 0.66
COL7A1-206ENST00000466591 UBA7P41226 1012 aa19.2■□□□□ 0.66
COL7A1-206ENST00000466591 GRM5P41594 1212 aa19.2■□□□□ 0.66
COL7A1-206ENST00000466591 CLCNKBP51801 687 aa19.2■□□□□ 0.66
COL7A1-206ENST00000466591 ATP2C1P98194 919 aaPredicted RBP19.2■□□□□ 0.66
COL7A1-206ENST00000466591 FEZF2Q8TBJ5 459 aa19.2■□□□□ 0.66
COL7A1-206ENST00000466591 TARS2Q9BW92 718 aaKnown RBP19.2■□□□□ 0.66
COL7A1-206ENST00000466591 CDT1Q9H211 546 aa19.2■□□□□ 0.66
COL7A1-206ENST00000466591 H0YCG3 227 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 EFEMP2O95967 443 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 MCF2P10911 925 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 FSHRP23945 695 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 NUBP1P53384 320 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 DHX8Q14562 1220 aaKnown RBP19.19■□□□□ 0.66
COL7A1-206ENST00000466591 IL17AQ16552 155 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 ASTLQ6HA08 431 aaPredicted RBP19.19■□□□□ 0.66
COL7A1-206ENST00000466591 MPZL3Q6UWV2 235 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 KCTD17Q8N5Z5 321 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 DDX27Q96GQ7 796 aaKnown RBP19.19■□□□□ 0.66
COL7A1-206ENST00000466591 RHOBTB2Q9BYZ6 727 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 ZHX3Q9H4I2 956 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 DUSP12Q9UNI6 340 aa19.19■□□□□ 0.66
COL7A1-206ENST00000466591 DENND4AQ7Z401 1863 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 CCL16O15467 120 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 BMP15O95972 392 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 CFHP08603 1231 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 HNRNPA1P09651 372 aaKnown RBP eCLIP19.18■□□□□ 0.66
COL7A1-206ENST00000466591 PLA2G4BP0C869 781 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 PLS3P13797 630 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 GUCY2CP25092 1073 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 ELF1P32519 619 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 OR1D2P34982 312 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 ARL6IP4Q66PJ3 421 aaKnown RBP19.18■□□□□ 0.66
COL7A1-206ENST00000466591 ANKS3Q6ZW76 656 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 C1orf186Q6ZWK4 172 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 GRASPQ7Z6J2 395 aaPredicted RBP19.18■□□□□ 0.66
COL7A1-206ENST00000466591 SIX5Q8N196 739 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 CEP120Q8N960 986 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 LNX1Q8TBB1 728 aaPredicted RBP19.18■□□□□ 0.66
COL7A1-206ENST00000466591 SLC7A14Q8TBB6 771 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 AK8Q96MA6 479 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 PPP1R10Q96QC0 940 aaKnown RBP19.18■□□□□ 0.66
COL7A1-206ENST00000466591 CXCL16Q9H2A7 254 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 GOLGA2P5Q9HBQ8 144 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 FAM86C1Q9NVL1 165 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 KCND2Q9NZV8 630 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 LARSQ9P2J5 1176 aaKnown RBP19.18■□□□□ 0.66
COL7A1-206ENST00000466591 ARHGAP28Q9P2N2 729 aa19.18■□□□□ 0.66
COL7A1-206ENST00000466591 FBXW11Q9UKB1 542 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms