RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SEZ6Q53EL9 994 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 HERC4Q5GLZ8 1057 aaPredicted RBP14.1□□□□□ -0.15
COL5A1-206ENST00000465877 ADALQ6DHV7 355 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 EP400NLQ6ZTU2 488 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 ZNF720Q7Z2F6 126 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 RBM23Q86U06 439 aaKnown RBP14.1□□□□□ -0.15
COL5A1-206ENST00000465877 CCDC65Q8IXS2 484 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 EFHBQ8N7U6 833 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 AUTS2Q8WXX7 1259 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 ACAP3Q96P50 834 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 ASB2Q96Q27 587 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 PPP1R10Q96QC0 940 aaKnown RBP14.1□□□□□ -0.15
COL5A1-206ENST00000465877 PAAF1Q9BRP4 392 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 FGFBP2Q9BYJ0 223 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 IGFLR1Q9H665 355 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 TLE6Q9H808 572 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 GDPD2Q9HCC8 539 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 TBC1D7Q9P0N9 293 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 CNTN3Q9P232 1028 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 STK39Q9UEW8 545 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 KCNH3Q9ULD8 1083 aa14.1□□□□□ -0.15
COL5A1-206ENST00000465877 A0A1B0GVL5 298 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 C2orf71A6NGG8 1288 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 TISP43B9A030 160 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 H3BQ06 376 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-206ENST00000465877 MEFVO15553 781 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-206ENST00000465877 ACTN4O43707 911 aaKnown RBP14.09□□□□□ -0.15
COL5A1-206ENST00000465877 FAM189A1O60320 539 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 KIF4AO95239 1232 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 GLP2RO95838 553 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 SOD2P04179 222 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 URODP06132 367 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 CXCL8P10145 99 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 MYBP10242 640 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 CMA1P23946 247 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 LTBRP36941 435 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 NDUFV1P49821 464 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 DLX2Q07687 328 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-206ENST00000465877 ALCAMQ13740 583 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 HSP90AA2PQ14568 343 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-206ENST00000465877 PTPN14Q15678 1187 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 DUSP6Q16828 381 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 XKR4Q5GH76 650 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 L1TD1Q5T7N2 865 aaKnown RBP14.09□□□□□ -0.15
COL5A1-206ENST00000465877 CNNM4Q6P4Q7 775 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 RNF168Q8IYW5 571 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-206ENST00000465877 CEP57L1Q8IYX8 460 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 RABGGTAQ92696 567 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 CDCA3Q99618 268 aaPredicted RBP14.09□□□□□ -0.15
COL5A1-206ENST00000465877 MSTO1Q9BUK6 570 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 STRA6Q9BX79 667 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 GOLGA2P5Q9HBQ8 144 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 ADAM28Q9UKQ2 775 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 HPSEQ9Y251 543 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 BDP1A6H8Y1 2624 aa14.09□□□□□ -0.15
COL5A1-206ENST00000465877 TTC28Q96AY4 2481 aa14.08□□□□□ -0.15
COL5A1-206ENST00000465877 ANKRD63C9JTQ0 380 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 PER2O15055 1255 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 OGTO15294 1046 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 EFEMP2O95967 443 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 CASP1P29466 404 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 TNFSF9P41273 254 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 RBM10P98175 930 aaKnown RBP14.08□□□□□ -0.16
COL5A1-206ENST00000465877 KCNA1Q09470 495 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 BMS1Q14692 1282 aaKnown RBP14.08□□□□□ -0.16
COL5A1-206ENST00000465877 LEXMQ3ZCV2 418 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 ZBTB41Q5SVQ8 909 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 FUT10Q6P4F1 479 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 ALKAL1Q6UXT8 129 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 VN1R2Q8NFZ6 395 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 HASPINQ8TF76 798 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 C7orf25Q9BPX7 421 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 COLEC11Q9BWP8 271 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 BLZF1Q9H2G9 400 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 IKZF4Q9H2S9 585 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 SERTAD1Q9UHV2 236 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 IRAK3Q9Y616 596 aa14.08□□□□□ -0.16
COL5A1-206ENST00000465877 SF3B1O75533 1304 aaKnown RBP eCLIP14.08□□□□□ -0.16
COL5A1-206ENST00000465877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-206ENST00000465877 A0A0B4J269 797 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 FAM237AA0A1B0GTK4 181 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 SMIM28A0A1B0GU29 152 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 A0A1W2PQ27 194 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 A0A1W2PQ64 194 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 A0A1W2PQD8 194 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 CLTAP09496 248 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 SLFN14P0C7P3 912 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 KCNE1P15382 129 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 ANP32AP39687 249 aaKnown RBP14.07□□□□□ -0.16
COL5A1-206ENST00000465877 AFMP43652 599 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 GLUD2P49448 558 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 PPP2R3AQ06190 1150 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 SOX4Q06945 474 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-206ENST00000465877 CUL4BQ13620 913 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 ENOX2Q16206 610 aaKnown RBP14.07□□□□□ -0.16
COL5A1-206ENST00000465877 KYAT1Q16773 422 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 FAM26FQ5R3K3 315 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 UNC13DQ70J99 1090 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 GRAMD1CQ8IYS0 662 aa14.07□□□□□ -0.16
COL5A1-206ENST00000465877 MRPL43Q8N983 215 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms