RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 KIF26AQ9ULI4 1882 aaPredicted RBP8.44□□□□□ -1.06
THBS3-205ENST00000465596 SMIM28A0A1B0GU29 152 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 HIDE1A8MVS5 230 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 TMEM189-UBE2V1I3L0A0 370 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 HNRNPDLO14979 420 aaKnown RBP8.43□□□□□ -1.06
THBS3-205ENST00000465596 LINC01565O15544 149 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 TGFB1I1O43294 461 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 KIF4AO95239 1232 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 KRT18P05783 430 aaKnown RBP8.43□□□□□ -1.06
THBS3-205ENST00000465596 CXCL8P10145 99 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 DLX2Q07687 328 aaPredicted RBP8.43□□□□□ -1.06
THBS3-205ENST00000465596 NCBP1Q09161 790 aaKnown RBP8.43□□□□□ -1.06
THBS3-205ENST00000465596 DPYDQ12882 1025 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 STRN3Q13033 797 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 TUSC3Q13454 348 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 PTPN14Q15678 1187 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 CCDC85BQ15834 202 aaPredicted RBP8.43□□□□□ -1.06
THBS3-205ENST00000465596 GLRA4Q5JXX5 417 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 TAS1R1Q7RTX1 841 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 ZBTB33Q86T24 672 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 DDX53Q86TM3 631 aaKnown RBP8.43□□□□□ -1.06
THBS3-205ENST00000465596 FSIP1Q8NA03 581 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 SLC17A8Q8NDX2 589 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 SPATA20Q8TB22 786 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 URGCPQ8TCY9 931 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 SCFD1Q8WVM8 642 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 ADPGKQ9BRR6 497 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 TRIM6Q9C030 488 aaPredicted RBP8.43□□□□□ -1.06
THBS3-205ENST00000465596 GZF1Q9H116 711 aaPredicted RBP8.43□□□□□ -1.06
THBS3-205ENST00000465596 GOLGA2P5Q9HBQ8 144 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 TLR9Q9NR96 1032 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 TSHZ2Q9NRE2 1034 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 FAM13BQ9NYF5 915 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 TBC1D7Q9P0N9 293 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 KANSL3Q9P2N6 904 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 ANKFY1Q9P2R3 1169 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 USP25Q9UHP3 1055 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 CPSF3Q9UKF6 684 aaKnown RBP8.43□□□□□ -1.06
THBS3-205ENST00000465596 GDAQ9Y2T3 454 aa8.43□□□□□ -1.06
THBS3-205ENST00000465596 PVALEFA0A1B0GWK0 134 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 C2orf71A6NGG8 1288 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 OGTO15294 1046 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 EIF3DO15371 548 aaKnown RBP eCLIP8.42□□□□□ -1.06
THBS3-205ENST00000465596 CLDN3O15551 220 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 GTPBP6O43824 516 aaPredicted RBP8.42□□□□□ -1.06
THBS3-205ENST00000465596 GADD45BO75293 160 aaPredicted RBP8.42□□□□□ -1.06
THBS3-205ENST00000465596 PRPF6O94906 941 aaKnown RBP8.42□□□□□ -1.06
THBS3-205ENST00000465596 PAPLNO95428 1278 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 CTSAP10619 480 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 ABCD1P33897 745 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 SYKP43405 635 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 OSTNP61366 133 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 ASIC1P78348 528 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 RBM10P98175 930 aaKnown RBP8.42□□□□□ -1.06
THBS3-205ENST00000465596 TFF2Q03403 129 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 ALCAMQ13740 583 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 PTPROQ16827 1216 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 UPP1Q16831 310 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 HERC4Q5GLZ8 1057 aaPredicted RBP8.42□□□□□ -1.06
THBS3-205ENST00000465596 FAM26FQ5R3K3 315 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 KRBA2Q6ZNG9 492 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 CLEC17AQ6ZS10 378 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 THNSL1Q8IYQ7 743 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 HACE1Q8IYU2 909 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 CXorf38Q8TB03 319 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 FEZF2Q8TBJ5 459 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 ZNF507Q8TCN5 953 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 TMEM174Q8WUU8 243 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 AUTS2Q8WXX7 1259 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 RABGGTAQ92696 567 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 C18orf25Q96B23 403 aaPredicted RBP8.42□□□□□ -1.06
THBS3-205ENST00000465596 PABPC5Q96DU9 382 aaKnown RBP8.42□□□□□ -1.06
THBS3-205ENST00000465596 MSLNLQ96KJ4 702 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 CBWD1Q9BRT8 395 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 HERC2P3Q9BVR0 1158 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 GPR62Q9BZJ7 368 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 GBP3Q9H0R5 595 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 MRPL44Q9H9J2 332 aaKnown RBP8.42□□□□□ -1.06
THBS3-205ENST00000465596 AAASQ9NRG9 546 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 CHST7Q9NS84 486 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 CLEC1BQ9P126 229 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 TUBGCP4Q9UGJ1 667 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 UBE4BO95155 1302 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 NUP210Q8TEM1 1887 aaPredicted RBP8.42□□□□□ -1.06
THBS3-205ENST00000465596 MYH10P35580 1976 aa8.42□□□□□ -1.06
THBS3-205ENST00000465596 VPS13AQ96RL7 3174 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 HELZP42694 1942 aaKnown RBP8.41□□□□□ -1.06
THBS3-205ENST00000465596 PTPRJQ12913 1337 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 CASTOR2A6NHX0 329 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 ZNF202O95125 648 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 GCNT3O95395 438 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 MYL1P05976 194 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 THP07101 528 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 CLTAP09496 248 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 IDEP14735 1019 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 AFMP43652 599 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 ALDH7A1P49419 539 aaKnown RBP8.41□□□□□ -1.06
THBS3-205ENST00000465596 AARSP49588 968 aaKnown RBP eCLIP8.41□□□□□ -1.06
THBS3-205ENST00000465596 LIG4P49917 911 aa8.41□□□□□ -1.06
THBS3-205ENST00000465596 CLCNKBP51801 687 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms