RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 SYKP43405 635 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 ATAT1Q5SQI0 421 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 KIAA1841Q6NSI8 718 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 STAMQ92783 540 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 PRIMPOLQ96LW4 560 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 PRRX2Q99811 253 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 NTPCRQ9BSD7 190 aaKnown RBP19.44■□□□□ 0.7
COL7A1-205ENST00000465238 KIFC3Q9BVG8 833 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 EMILIN2Q9BXX0 1053 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 EIF2AQ9BY44 585 aaKnown RBP19.44■□□□□ 0.7
COL7A1-205ENST00000465238 FZD8Q9H461 694 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 KBTBD4Q9NVX7 518 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 USP25Q9UHP3 1055 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 SERTAD1Q9UHV2 236 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 HPSEQ9Y251 543 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 PHLPP2Q6ZVD8 1323 aa19.44■□□□□ 0.7
COL7A1-205ENST00000465238 FAM237AA0A1B0GTK4 181 aa19.43■□□□□ 0.7
COL7A1-205ENST00000465238 H0YCG3 227 aa19.43■□□□□ 0.7
COL7A1-205ENST00000465238 SLC16A4O15374 487 aa19.43■□□□□ 0.7
COL7A1-205ENST00000465238 PRKCBP05771 671 aa19.43■□□□□ 0.7
COL7A1-205ENST00000465238 NDUFA8P51970 172 aa19.43■□□□□ 0.7
COL7A1-205ENST00000465238 TMEM132AQ24JP5 1023 aa19.43■□□□□ 0.7
COL7A1-205ENST00000465238 ALYREFQ86V81 257 aaKnown RBP19.43■□□□□ 0.7
COL7A1-205ENST00000465238 HACE1Q8IYU2 909 aa19.43■□□□□ 0.7
COL7A1-205ENST00000465238 C12orf76Q8N812 135 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-205ENST00000465238 ASIC4Q96FT7 647 aa19.43■□□□□ 0.7
COL7A1-205ENST00000465238 CPB2Q96IY4 423 aa19.43■□□□□ 0.7
COL7A1-205ENST00000465238 MRPL17Q9NRX2 175 aaKnown RBP19.43■□□□□ 0.7
COL7A1-205ENST00000465238 TDRD15B5MCY1 1934 aaKnown RBP19.43■□□□□ 0.7
COL7A1-205ENST00000465238 ARL5CA6NH57 179 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 C2CD4DB7Z1M9 353 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 SLFN14P0C7P3 912 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 IDEP14735 1019 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 KLRC2P26717 231 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 ZNF131P52739 623 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 PRPF4BQ13523 1007 aaKnown RBP19.42■□□□□ 0.7
COL7A1-205ENST00000465238 AMHR2Q16671 573 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 FAM187BQ17R55 369 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 PPP4R3CPQ6ZMV5 832 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 COLGALT2Q8IYK4 626 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 DNAJC19Q96DA6 116 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 KLHL5Q96PQ7 755 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 GAD1Q99259 594 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 TRIM6Q9C030 488 aaPredicted RBP19.42■□□□□ 0.7
COL7A1-205ENST00000465238 CCDC113Q9H0I3 377 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 TMEM134Q9H6X4 195 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 SFXN1Q9H9B4 322 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 ARHGAP28Q9P2N2 729 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 SORCS3Q9UPU3 1222 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 USTQ9Y2C2 406 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 SSX2IPQ9Y2D8 614 aa19.42■□□□□ 0.7
COL7A1-205ENST00000465238 ACKR2O00590 384 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 B4GALT5O43286 388 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 TRAK2O60296 914 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 LILRB3O75022 631 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 NR1I2O75469 434 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 SOD2P04179 222 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 URODP06132 367 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 CNPP09543 421 aaKnown RBP19.41■□□□□ 0.7
COL7A1-205ENST00000465238 WEE2P0C1S8 567 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 GAP43P17677 238 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 ARF4P18085 180 aaPredicted RBP19.41■□□□□ 0.7
COL7A1-205ENST00000465238 MLH1P40692 756 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 AFMP43652 599 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 CLCN4P51793 760 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 DSC1Q08554 894 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 STRN3Q13033 797 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 MTMR3Q13615 1198 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 CCDC65Q8IXS2 484 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 UBALD2Q8IYN6 164 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 PLCD3Q8N3E9 789 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 TDRD5Q8NAT2 981 aaKnown RBP19.41■□□□□ 0.7
COL7A1-205ENST00000465238 KREMEN2Q8NCW0 462 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 RNF39Q9H2S5 420 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 GIT1Q9Y2X7 761 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 PRG3Q9Y2Y8 225 aaPredicted RBP19.41■□□□□ 0.7
COL7A1-205ENST00000465238 HES2Q9Y543 173 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 KMT2EQ8IZD2 1858 aa19.41■□□□□ 0.7
COL7A1-205ENST00000465238 DENND4AQ7Z401 1863 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.4■□□□□ 0.7
COL7A1-205ENST00000465238 SPDYE4A6NLX3 237 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 ACTN4O43707 911 aaKnown RBP19.4■□□□□ 0.7
COL7A1-205ENST00000465238 SCP2P22307 547 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 OR1G1P47890 313 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 NCKAP1LP55160 1127 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 KANK3Q6NY19 840 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 SLC27A1Q6PCB7 646 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 TMC5Q6UXY8 1006 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 HAUS6Q7Z4H7 955 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 GPR149Q86SP6 731 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 ZDHHC14Q8IZN3 488 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 TMEM161BQ8NDZ6 487 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 ZFP42Q96MM3 310 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 C7orf25Q9BPX7 421 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 HERC2P3Q9BVR0 1158 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 TRIM9Q9C026 710 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 GOLPH3LQ9H4A5 285 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 PANK4Q9NVE7 773 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 MARCH5Q9NX47 278 aa19.4■□□□□ 0.7
COL7A1-205ENST00000465238 SEL1LQ9UBV2 794 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms