RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FRMD4BQ9Y2L6 1034 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 HES2Q9Y543 173 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 IPPQ9Y573 584 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 C9IYK1 514 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 ZNF623O75123 536 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 CLTAP09496 248 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 ACRP10323 421 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 GRM5P41594 1212 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 TRIM14Q14142 442 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 E4F1Q66K89 784 aaPredicted RBP18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 SLC24A5Q71RS6 500 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 C16orf59Q7L2K0 433 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 TMEM139Q8IV31 216 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 BORCS6Q96GS4 357 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 MKNK1Q9BUB5 465 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 IL23AQ9NPF7 189 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 SNTG2Q9NY99 539 aa18.38■□□□□ 0.53
EXOSC3-203ENST00000465229 ZNF233A6NK53 670 aa18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 AKR1B15C9JRZ8 316 aaPredicted RBP18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 SLC16A3O15427 465 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 ADRB2P07550 413 aa18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 PFKMP08237 780 aa18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 FAM189BP81408 668 aa18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 FPGSQ05932 587 aa18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 MRPL10Q7Z7H8 261 aaKnown RBP18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 PPFIBP1Q86W92 1011 aa18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 FAM186BQ8IYM0 893 aa18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 MAGEC2Q9UBF1 373 aaPredicted RBP18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 NR2E3Q9Y5X4 410 aa18.37■□□□□ 0.53
EXOSC3-203ENST00000465229 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 A0A1W2PQC6 194 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 MAPK13O15264 365 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 MEFVO15553 781 aaPredicted RBP18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 GNA14O95837 355 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 EPB41P11171 864 aaKnown RBP18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 TNNT1P13805 278 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 RAB27AP51159 221 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 PPIGQ13427 754 aaKnown RBP eCLIP18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 IKBKEQ14164 716 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 ENOX2Q16206 610 aaKnown RBP18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 KYAT1Q16773 422 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 ECHDC2Q86YB7 292 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 MFSD14AQ96MC6 490 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 ACAP3Q96P50 834 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 BAG1Q99933 345 aaPredicted RBP18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 NAA15Q9BXJ9 866 aaKnown RBP18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 C1orf112Q9NSG2 853 aa18.36■□□□□ 0.53
EXOSC3-203ENST00000465229 LGALS16A8MUM7 142 aa18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 ATF7P17544 494 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 AKAP5P24588 427 aa18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 EPHB4P54760 987 aa18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 MARSP56192 900 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 PTPN14Q15678 1187 aa18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 SLC10A6Q3KNW5 377 aa18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 FRMD5Q7Z6J6 570 aa18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 ZNF598Q86UK7 904 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 CNGA4Q8IV77 575 aa18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 MYRIPQ8NFW9 859 aa18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 CNOT6LQ96LI5 555 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 C16orf45Q96MC5 204 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 CCDC94Q9BW85 323 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 RBAKQ9NYW8 714 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 PAXBP1Q9Y5B6 917 aa18.35■□□□□ 0.53
EXOSC3-203ENST00000465229 ABHD14A-ACY1A0A1B0GW23 586 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 USP27XA6NNY8 438 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 MEIS3P2A8K0S8 358 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 TPM1P09493 284 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 CXCL8P10145 99 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 SKIP12755 728 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 FECHP22830 423 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 WNT7BP56706 349 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 MCCD1P59942 119 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 POU5F1Q01860 360 aaKnown RBP18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 CYP24A1Q07973 514 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 HSP90AA2PQ14568 343 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 CCDC40Q4G0X9 1142 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 CREBRFQ8IUR6 639 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 BRSK2Q8IWQ3 736 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 APOL6Q9BWW8 343 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 VPS16Q9H269 839 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 RPF1Q9H9Y2 349 aaKnown RBP18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 METTL14Q9HCE5 456 aaKnown RBP18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 TAB2Q9NYJ8 693 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 ARMCX3Q9UH62 379 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 RECQL4O94761 1208 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 EOMESO95936 686 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 ITGA4P13612 1032 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 IBSPP21815 317 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.34■□□□□ 0.537e-8■■□□□ 12.7
EXOSC3-203ENST00000465229 AGMOQ6ZNB7 445 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 PLEKHO2Q8TD55 490 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 LPPQ93052 612 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 PPP1R13BQ96KQ4 1090 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 LBHD1Q9BQE6 289 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 PDE11AQ9HCR9 933 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 PARP2Q9UGN5 583 aa18.34■□□□□ 0.53
EXOSC3-203ENST00000465229 TTC26A0AVF1 554 aa18.33■□□□□ 0.52
EXOSC3-203ENST00000465229 ZSCAN12O43309 604 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms