RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 MTCL1Q9Y4B5 1905 aaKnown RBP25.09■■□□□ 1.61
USP42-205ENST00000465073 ANHXE9PGG2 379 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 STK25O00506 426 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 LIN9Q5TKA1 542 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 ASCL5Q7RTU5 278 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 APBB1IPQ7Z5R6 666 aaPredicted RBP25.09■■□□□ 1.61
USP42-205ENST00000465073 C4orf32Q8N8J7 132 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 DTWD2Q8NBA8 298 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 ZSCAN31Q96LW9 406 aaPredicted RBP25.09■■□□□ 1.61
USP42-205ENST00000465073 CXCL16Q9H2A7 254 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 BHMT2Q9H2M3 363 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 LRWD1Q9UFC0 647 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 NOL7Q9UMY1 257 aaKnown RBP25.09■■□□□ 1.61
USP42-205ENST00000465073 GDAQ9Y2T3 454 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 STK24Q9Y6E0 443 aa25.09■■□□□ 1.61
USP42-205ENST00000465073 KRBA1A5PL33 1030 aa25.08■■□□□ 1.6
USP42-205ENST00000465073 EDN1P05305 212 aa25.08■■□□□ 1.6
USP42-205ENST00000465073 FSHRP23945 695 aa25.08■■□□□ 1.6
USP42-205ENST00000465073 PDIA5Q14554 519 aa25.08■■□□□ 1.6
USP42-205ENST00000465073 ECM1Q16610 540 aa25.08■■□□□ 1.6
USP42-205ENST00000465073 KIFC3Q9BVG8 833 aa25.08■■□□□ 1.6
USP42-205ENST00000465073 PRR23AA6NEV1 266 aa25.07■■□□□ 1.6
USP42-205ENST00000465073 HOXA9P31269 272 aa25.07■■□□□ 1.6
USP42-205ENST00000465073 HTR4Q13639 388 aa25.07■■□□□ 1.6
USP42-205ENST00000465073 PPM1LQ5SGD2 360 aa25.07■■□□□ 1.6
USP42-205ENST00000465073 NT5DC1Q5TFE4 455 aa25.07■■□□□ 1.6
USP42-205ENST00000465073 ATF7IP2Q5U623 682 aa25.07■■□□□ 1.6
USP42-205ENST00000465073 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.07■■□□□ 1.6
USP42-205ENST00000465073 FAM184AQ8NB25 1140 aa25.07■■□□□ 1.6
USP42-205ENST00000465073 KIAA1024Q9UPX6 916 aa25.07■■□□□ 1.6
USP42-205ENST00000465073 RIF1Q5UIP0 2472 aaKnown RBP25.07■■□□□ 1.6
USP42-205ENST00000465073 TMEM189-UBE2V1I3L0A0 370 aa25.06■■□□□ 1.6
USP42-205ENST00000465073 K7ERI5 159 aa25.06■■□□□ 1.6
USP42-205ENST00000465073 RFX1P22670 979 aa25.06■■□□□ 1.6
USP42-205ENST00000465073 DCLRE1AQ6PJP8 1040 aa25.06■■□□□ 1.6
USP42-205ENST00000465073 GRASPQ7Z6J2 395 aaPredicted RBP25.06■■□□□ 1.6
USP42-205ENST00000465073 FRMD5Q7Z6J6 570 aa25.06■■□□□ 1.6
USP42-205ENST00000465073 POLD4Q9HCU8 107 aa25.06■■□□□ 1.6
USP42-205ENST00000465073 CFAP54Q96N23 3096 aa25.06■■□□□ 1.6
USP42-205ENST00000465073 DOCK8Q8NF50 2099 aa25.05■■□□□ 1.6
USP42-205ENST00000465073 C8AP07357 584 aa25.05■■□□□ 1.6
USP42-205ENST00000465073 FGFR3P22607 806 aa25.05■■□□□ 1.6
USP42-205ENST00000465073 RAB33AQ14088 237 aa25.05■■□□□ 1.6
USP42-205ENST00000465073 ANGPT1Q15389 498 aa25.05■■□□□ 1.6
USP42-205ENST00000465073 NKD2Q969F2 451 aaPredicted RBP25.05■■□□□ 1.6
USP42-205ENST00000465073 UROC1Q96N76 676 aa25.05■■□□□ 1.6
USP42-205ENST00000465073 PPP1R10Q96QC0 940 aaKnown RBP25.05■■□□□ 1.6
USP42-205ENST00000465073 RAB34Q9BZG1 259 aa25.05■■□□□ 1.6
USP42-205ENST00000465073 SH2B1Q9NRF2 756 aaPredicted RBP25.05■■□□□ 1.6
USP42-205ENST00000465073 CA14Q9ULX7 337 aa25.05■■□□□ 1.6
USP42-205ENST00000465073 ADAM12O43184 909 aa25.04■■□□□ 1.6
USP42-205ENST00000465073 XYLBO75191 536 aa25.04■■□□□ 1.6
USP42-205ENST00000465073 B3GAT3O94766 335 aa25.04■■□□□ 1.6
USP42-205ENST00000465073 UVSSAQ2YD98 709 aa25.04■■□□□ 1.6
USP42-205ENST00000465073 GPR152Q8TDT2 470 aa25.04■■□□□ 1.6
USP42-205ENST00000465073 TBC1D17Q9HA65 648 aa25.04■■□□□ 1.6
USP42-205ENST00000465073 SLC2A4RGQ9NR83 387 aa25.04■■□□□ 1.6
USP42-205ENST00000465073 DDX19AQ9NUU7 478 aaKnown RBP25.04■■□□□ 1.6
USP42-205ENST00000465073 CDH7Q9ULB5 785 aa25.04■■□□□ 1.6
USP42-205ENST00000465073 TNFSF13BQ9Y275 285 aa25.04■■□□□ 1.6
USP42-205ENST00000465073 NUMBLQ9Y6R0 609 aa25.04■■□□□ 1.6
USP42-205ENST00000465073 TRAPPC3O43617 180 aa25.03■■□□□ 1.6
USP42-205ENST00000465073 U2AF2P26368 475 aaKnown RBP eCLIP25.03■■□□□ 1.63e-6■■■□□ 15.4
USP42-205ENST00000465073 NBR1Q14596 966 aa25.03■■□□□ 1.6
USP42-205ENST00000465073 AXDND1Q5T1B0 1012 aaPredicted RBP25.03■■□□□ 1.6
USP42-205ENST00000465073 PHLDB3Q6NSJ2 640 aa25.03■■□□□ 1.6
USP42-205ENST00000465073 RTL10Q7L3V2 364 aa25.03■■□□□ 1.6
USP42-205ENST00000465073 IGSF22Q8N9C0 903 aa25.03■■□□□ 1.6
USP42-205ENST00000465073 DNM3Q9UQ16 869 aa25.03■■□□□ 1.6
USP42-205ENST00000465073 POU2F2P09086 479 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 OR1D2P34982 312 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 PTGDRQ13258 359 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 GLRA4Q5JXX5 417 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 SNX29Q8TEQ0 813 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 MTRRQ9UBK8 725 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 FAM186AA6NE01 2351 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 CCDC169A6NNP5 214 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 CCL16O15467 120 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 CLCNKBP51801 687 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 NTHL1P78549 312 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 UPP1Q16831 310 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 SLC7A14Q8TBB6 771 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 CCDC94Q9BW85 323 aaPredicted RBP25.02■■□□□ 1.6
USP42-205ENST00000465073 TMEM134Q9H6X4 195 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 ARHGEF3Q9NR81 526 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 TOPORSQ9NS56 1045 aaPredicted RBP25.02■■□□□ 1.6
USP42-205ENST00000465073 POLIQ9UNA4 740 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 BACE2Q9Y5Z0 518 aa25.02■■□□□ 1.6
USP42-205ENST00000465073 PHLPP2Q6ZVD8 1323 aa25.01■■□□□ 1.59
USP42-205ENST00000465073 SMIM28A0A1B0GU29 152 aa25.01■■□□□ 1.59
USP42-205ENST00000465073 GRM5P41594 1212 aa25.01■■□□□ 1.59
USP42-205ENST00000465073 NPTX2P47972 431 aa25.01■■□□□ 1.59
USP42-205ENST00000465073 TOB1P50616 345 aaPredicted RBP25.01■■□□□ 1.59
USP42-205ENST00000465073 YARSP54577 528 aaKnown RBP25.01■■□□□ 1.59
USP42-205ENST00000465073 PEX3P56589 373 aa25.01■■□□□ 1.59
USP42-205ENST00000465073 ANKS3Q6ZW76 656 aa25.01■■□□□ 1.59
USP42-205ENST00000465073 ACO2Q99798 780 aaKnown RBP25.01■■□□□ 1.59
USP42-205ENST00000465073 LAD1O00515 517 aa25■■□□□ 1.59
USP42-205ENST00000465073 IGFBP6P24592 240 aaPredicted RBP25■■□□□ 1.59
USP42-205ENST00000465073 DMP1Q13316 513 aaPredicted RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms