RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 IQCA1Q86XH1 822 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 HOMER1Q86YM7 354 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 GRIN3AQ8TCU5 1115 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 HERVK_113Q902F9 699 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 ESR2Q92731 530 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 MRFAP1L1Q96HT8 127 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 NCAPGQ9BPX3 1015 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 DSCC1Q9BVC3 393 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 GBP3Q9H0R5 595 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 PSD3Q9NYI0 1048 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 COL20A1Q9P218 1284 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 BCCIPQ9P287 314 aaKnown RBP eCLIP6.31□□□□□ -1.4
CMTM1-207ENST00000465057 LIMCH1Q9UPQ0 1083 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 OAS3Q9Y6K5 1087 aaKnown RBP6.31□□□□□ -1.4
CMTM1-207ENST00000465057 KAT6AQ92794 2004 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 LOXHD1Q8IVV2 1947 aa6.31□□□□□ -1.4
CMTM1-207ENST00000465057 NKRFO15226 690 aaKnown RBP eCLIP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 ZSCAN12O43309 604 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 KIF1CO43896 1103 aaKnown RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 DHX16O60231 1041 aaKnown RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 RNGTTO60942 597 aaKnown RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 FBXO24O75426 580 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 SMC2O95347 1197 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 PARNO95453 639 aaKnown RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 TXNP10599 105 aaKnown RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 SKILP12757 684 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 SMARCA1P28370 1054 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 KCNJ6P48051 423 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 ANKRD1Q15327 319 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 RAB30Q15771 203 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 STX1AQ16623 288 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 LY6KQ17RY6 165 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 QRICH1Q2TAL8 776 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 BRDTQ58F21 947 aaPredicted RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 FBXO38Q6PIJ6 1188 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 SARM1Q6SZW1 724 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 SEPT14Q6ZU15 432 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 CHST3Q7LGC8 479 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 RPAINQ86UA6 219 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 ADGRF4Q8IZF3 695 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 TMTC2Q8N394 836 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 ENAHQ8N8S7 591 aaPredicted RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 DNERQ8NFT8 737 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 FBXO18Q8NFZ0 1043 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 BICD2Q8TD16 824 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 SCFD2Q8WU76 684 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 EXOC4Q96A65 974 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 TAAR1Q96RJ0 339 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 MAP3K14Q99558 947 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 TACO1Q9BSH4 297 aaKnown RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 MTG1Q9BT17 334 aaPredicted RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 KRT23Q9C075 422 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 MTIF3Q9H2K0 278 aaKnown RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 KAT14Q9H8E8 782 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 VAT1LQ9HCJ6 419 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 KCND1Q9NSA2 647 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 FAM53CQ9NYF3 392 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 ZSWIM5Q9P217 1185 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 MSRAQ9UJ68 235 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 PCOLCE2Q9UKZ9 415 aa6.3□□□□□ -1.4
CMTM1-207ENST00000465057 ZNF215Q9UL58 517 aaPredicted RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 PRRC2BQ5JSZ5 2229 aaKnown RBP6.3□□□□□ -1.4
CMTM1-207ENST00000465057 ABCB11O95342 1321 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 C5orf42Q9H799 3197 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 VPS37CA5D8V6 355 aaPredicted RBP6.29□□□□□ -1.4
CMTM1-207ENST00000465057 MYO1CO00159 1063 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 RFXAPO00287 272 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 CBFA2T2O43439 604 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 SORBS3O60504 671 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 PRNPP04156 253 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 RPLP2P05387 115 aaKnown RBP6.29□□□□□ -1.4
CMTM1-207ENST00000465057 TUBBP07437 444 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 MMP3P08254 477 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 PARP1P09874 1014 aaKnown RBP6.29□□□□□ -1.4
CMTM1-207ENST00000465057 GNA15P30679 374 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 MAGEA9P43362 315 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 ZNF165P49910 485 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 LRRC14Q15048 493 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 IMMTQ16891 758 aaKnown RBP6.29□□□□□ -1.4
CMTM1-207ENST00000465057 ANO6Q4KMQ2 910 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 ARHGAP29Q52LW3 1261 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 ASPRV1Q53RT3 343 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 SCARA3Q6AZY7 606 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 KCNV1Q6PIU1 500 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 CYB5R4Q7L1T6 521 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 SPRED2Q7Z698 418 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 PLA2G4DQ86XP0 818 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 MCF2L2Q86YR7 1114 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 C10orf67Q8IYJ2 551 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 CEP57L1Q8IYX8 460 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 RPUSD2Q8IZ73 545 aaKnown RBP6.29□□□□□ -1.4
CMTM1-207ENST00000465057 SYTL5Q8TDW5 730 aaPredicted RBP6.29□□□□□ -1.4
CMTM1-207ENST00000465057 AFG1LQ8WV93 481 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 FUCA2Q9BTY2 467 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 JMJD4Q9H9V9 463 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 CERS4Q9HA82 394 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 SLC28A3Q9HAS3 691 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 ARFGAP3Q9NP61 516 aa6.29□□□□□ -1.4
CMTM1-207ENST00000465057 RBM28Q9NW13 759 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms